Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00511
         (763 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4N368 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q23VF3 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_Q7RC73 Cluster: Putative uncharacterized protein PY0591...    33   5.8  

>UniRef50_Q4N368 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 354

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +2

Query: 572 SVFNKLNAQFINIIVFKHSHCIFLSFYSRDCFYSIVI-FHRLLFFEYILLLMFVGTSINF 748
           S +NKL+   ++++ F+    IFL  +  + F+S +I F  LLF   +LL  F    I  
Sbjct: 104 SDYNKLSIMTVSLMTFQEVFEIFLLLFHSNIFFSSLIYFTLLLFLNTVLLFSFGDRRIRI 163

Query: 749 KKKK 760
           K  K
Sbjct: 164 KSDK 167


>UniRef50_Q23VF3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 783

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
 Frame = +2

Query: 470 NIVDLVRNLNYKRRNINGRH-LNNDAIACCSFSQLSV---FNKLNAQFINIIVFKHSHCI 637
           N+ +LV +LN  +    G   L+   ++C + S L +    NK++A+F++ +    ++C 
Sbjct: 354 NLSELVLDLNSNKIGDKGALCLSQALLSCTNLSSLKLKLQSNKISAKFVSGLGHVQANCT 413

Query: 638 FLSFYSRDCFYSIV 679
            LSF+  D  Y+I+
Sbjct: 414 NLSFFELDVSYNII 427


>UniRef50_Q7RC73 Cluster: Putative uncharacterized protein PY05911;
            n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY05911 - Plasmodium yoelii yoelii
          Length = 1182

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
 Frame = +2

Query: 470  NIVDLVRNLNYKRRNI-NGRHLNNDAIAC-CSFSQLSVFNKLNAQFINIIVFKHSHCIFL 643
            NI+ +V+N+NYK   I NG    +  I C C  + +S+++ +N + + II   H     L
Sbjct: 965  NIITVVKNINYKNTPILNGDISKDGGILCICHDTIISIWDCINLKTLAII--NHPMYTLL 1022

Query: 644  SFYSRDCFYSIVIFH 688
            + Y  + +  I IF+
Sbjct: 1023 NDYIFNLYKGIEIFN 1037


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,577,324
Number of Sequences: 1657284
Number of extensions: 11890557
Number of successful extensions: 32356
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32315
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)