Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00511
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.87 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.87 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.2  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.0  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.0  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.0  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.5  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   4.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 395 YCFNLFILGRDLYWLFVSIICY 330
           Y FNLF L    YWL V +  +
Sbjct: 317 YTFNLFYLCFCFYWLLVMVAMF 338


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 395 YCFNLFILGRDLYWLFVSIICY 330
           Y FNLF L    YWL V +  +
Sbjct: 273 YTFNLFYLCFCFYWLLVMVAMF 294


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 147 HRGHCSPLSPGVFPELCHM 203
           H G C  + PG+F   C M
Sbjct: 112 HNGSCLYVPPGIFKSTCKM 130


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 147 HRGHCSPLSPGVFPELCHM 203
           H G C  + PG+F   C M
Sbjct: 112 HGGSCLYVPPGIFKSTCKM 130


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 147 HRGHCSPLSPGVFPELCHM 203
           H G C  + PG+F   C M
Sbjct: 112 HGGSCLYVPPGIFKSTCKM 130


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 147 HRGHCSPLSPGVFPELCHM 203
           H G C  + PG+F   C M
Sbjct: 112 HGGSCLYVPPGIFKSTCKM 130


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 147 HRGHCSPLSPGVFPELC 197
           H G C  + PG+F   C
Sbjct: 112 HNGSCLYVPPGIFKSTC 128


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 270 CTYLFIYLPQGEPTAH*DNNVTNNRNKKPIKV 365
           C YL I++PQ     H  +     R K P+ V
Sbjct: 13  CLYLNIWVPQRLRIRHHGDKPPQERPKVPVLV 44


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 604 NKLCIKFIEDTQLTKTTTC 548
           N+ C+K++ + + T   TC
Sbjct: 50  NQKCVKYLVEDEETSLATC 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,138
Number of Sequences: 336
Number of extensions: 3415
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)