Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00511
         (763 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722           31   0.76 
10_08_0397 + 17571492-17571664,17571875-17572034,17572140-175722...    28   9.3  
02_03_0288 - 17328805-17328828,17328888-17328989,17329069-173292...    28   9.3  

>02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722
          Length = 1155

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -2

Query: 255 LPSWADWLTNSTTRRAMTCDTARGTLRGRAVNNDLCG 145
           L SW D  T     R ++C  A G  RGR V  DL G
Sbjct: 69  LESWGDGSTPLCRWRGVSCGVAAGRRRGRVVALDLAG 105


>10_08_0397 +
           17571492-17571664,17571875-17572034,17572140-17572222,
           17572333-17572468,17572515-17572610,17573105-17573218,
           17573322-17573405,17573493-17573648,17573744-17573818,
           17574318-17574424,17574508-17574688,17574832-17575020,
           17575397-17575477,17575621-17575755,17576007-17576329,
           17576503-17576608,17576734-17576883,17577034-17577180
          Length = 831

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 539 DAIACCSFSQLSVFNKLNAQFINII 613
           DAI CCSF +  VF   N   +N++
Sbjct: 725 DAILCCSFKEKPVFTFANEMGLNML 749


>02_03_0288 -
           17328805-17328828,17328888-17328989,17329069-17329239,
           17329471-17329572,17331257-17331387,17335329-17335460,
           17335616-17335792,17335897-17336077
          Length = 339

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 725 TSTIKCIRKITIDEILQYCKSSHENKRIEKC 633
           TS I C+   T+D I+ Y KS  + K  E C
Sbjct: 182 TSRIPCVHDWTVDGIINYAKSLPDVKDEEFC 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,401,349
Number of Sequences: 37544
Number of extensions: 296506
Number of successful extensions: 709
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)