Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00511
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.6
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.6
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.6
AC006729-7|AAF60463.1| 157|Caenorhabditis elegans Hypothetical ... 29 3.6
U13072-6|AAK31399.1| 327|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81585-6|CAB04684.2| 482|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical pr... 28 8.3
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm... 28 8.3
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm... 28 8.3
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ... 28 8.3
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 172 PPECSPSCVTCHCSSCGTIC*PIC 243
P C C TC C+ C T C P C
Sbjct: 79 PKCCCTCCRTCCCTRCCTCCRPCC 102
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 172 PPECSPSCVTCHCSSCGTIC*PIC 243
P C C TC C+ C T C P C
Sbjct: 81 PKCCCTCCRTCCCTRCCTCCRPCC 104
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 172 PPECSPSCVTCHCSSCGTIC*PIC 243
P C C TC C+ C T C P C
Sbjct: 84 PKCCCTCCRTCCCTRCCTCCRPCC 107
>Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical
protein AC3.8 protein.
Length = 531
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 629 HCIFLSFYSRDCFYSIVIFHRLLFFEYILLLMFVGTSINFKKKKK 763
H F+ +Y D + I+IF + + L++ FV I FK K+K
Sbjct: 486 HYNFIKYYMLDAYAIIIIFFLSILYVLNLIIKFVYRKI-FKSKRK 529
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 181 CSPSCVTCHCSSCGTIC*PIC 243
C C TC C+ C T C P C
Sbjct: 100 CCTCCRTCCCTRCCTCCRPCC 120
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 181 CSPSCVTCHCSSCGTIC*PIC 243
C C TC C+ C T C P C
Sbjct: 98 CCTCCRTCCCTRCCTCCRPCC 118
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 181 CSPSCVTCHCSSCGTIC*PIC 243
C C TC C+ C T C P C
Sbjct: 99 CCTCCRTCCCTRCCTCCRPCC 119
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 181 CSPSCVTCHCSSCGTIC*PIC 243
C C TC C+ C T C P C
Sbjct: 99 CCTCCRTCCCTRCCTCCRPCC 119
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 181 CSPSCVTCHCSSCGTIC*PIC 243
C C TC C+ C T C P C
Sbjct: 100 CCTCCRTCCCTRCCTCCRPCC 120
>AC006729-7|AAF60463.1| 157|Caenorhabditis elegans Hypothetical
protein Y24D9A.6 protein.
Length = 157
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 578 FNKLNAQFINIIVFKHSHCIFLSFYSRDCFYSIVIFHRLLFFEYIL 715
+ K N QFI ++F S + FYS+ CF + F F I+
Sbjct: 4 YRKKNGQFIFCLIFMCSSPLKKIFYSKTCFTHFLSFLFQFFLNSII 49
>U13072-6|AAK31399.1| 327|Caenorhabditis elegans Hypothetical
protein C07D10.1 protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 566 QLSVFNKLNAQFINIIVFKHSHCIFLSFYSRDCFYSIVIFHRLLFFEYILLLMFVGTS 739
++S KL +F N+I F SHC F F S IF +L +Y+ + FVG+S
Sbjct: 140 KISSILKLLERFPNLIRFSLSHC-FTEFVSIG-----EIFKKLSHLQYLRVYDFVGSS 191
>Z81585-6|CAB04684.2| 482|Caenorhabditis elegans Hypothetical
protein T05E12.6a protein.
Length = 482
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 533 NNDAIACCSFSQLSVFNKLN-AQFINIIVFKHSHCIFLSFYSRDCFYSIVIFHRLLFFEY 709
N+ I+ C L N N QF +I K C +S +R+ ++ ++HR Y
Sbjct: 231 NSGFISDCPMIVLDYENTKNITQFYSIYCMKDQECEPMSMDARNSVVALQLYHRPAAVHY 290
Query: 710 IL 715
+L
Sbjct: 291 VL 292
>Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical
protein F11D11.6 protein.
Length = 141
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +2
Query: 548 ACCSFSQLSVFNKLNAQFIN-IIVFKH-SHCIFLSFYSRDCFYSIVIFHRLLFFEYILLL 721
A C + + ++ + +Q N + FK C F DCF ++ + + +FF Y
Sbjct: 22 ANCQYRTVLIYGGVASQGANDLTAFKTVGECKNGCFVKNDCFLALFVIDKCIFFSYTA-- 79
Query: 722 MFVGTSINFKKKKK 763
GT+I + K
Sbjct: 80 --AGTTITVTPRSK 91
>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform a protein.
Length = 1117
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 524 RHLNNDAIACCSFSQLSVFNKLNAQFINIIVFKHSHCIFLSFYSRDC 664
+H N A C++ ++ N L + FI + + + I L F +RDC
Sbjct: 73 KHANQRAYVTCNYDMINPSNWLFSHFIEVKTARRIY-IELLFNTRDC 118
>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform b protein.
Length = 1122
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 524 RHLNNDAIACCSFSQLSVFNKLNAQFINIIVFKHSHCIFLSFYSRDC 664
+H N A C++ ++ N L + FI + + + I L F +RDC
Sbjct: 73 KHANQRAYVTCNYDMINPSNWLFSHFIEVKTARRIY-IELLFNTRDC 118
>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
tyrosine kinase protein.
Length = 1122
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 524 RHLNNDAIACCSFSQLSVFNKLNAQFINIIVFKHSHCIFLSFYSRDC 664
+H N A C++ ++ N L + FI + + + I L F +RDC
Sbjct: 73 KHANQRAYVTCNYDMINPSNWLFSHFIEVKTARRIY-IELLFNTRDC 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,513,907
Number of Sequences: 27780
Number of extensions: 301472
Number of successful extensions: 934
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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