Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00511
         (763 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g10836.1 68415.m01153 hypothetical protein                          28   5.9  
At1g61710.1 68414.m06960 DC1 domain-containing protein contains ...    28   5.9  

>At2g10836.1 68415.m01153 hypothetical protein
          Length = 282

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = -1

Query: 640 KNAMGMLKYYNINKLCIKFIEDTQLTK----TTTCYSVII*MTSVDISTFIIQIS 488
           K+A+G  +    NKL IKF++ T+L+         Y V++ + ++    F+ Q+S
Sbjct: 112 KSAVGRKRPLTDNKLRIKFLQTTKLSPVDRLVPNAYGVVVRVENITRPDFVPQVS 166


>At1g61710.1 68414.m06960 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 402

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 608 IIVFKHSHCIFLSFYSRDCFYSIVIFHRLLFFEY 709
           I + +H+H I  +F  R C +S  +FH+++  +Y
Sbjct: 163 IKISRHNHRISYTFSLRSCEWSCGVFHQIIDGDY 196


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,960,642
Number of Sequences: 28952
Number of extensions: 257713
Number of successful extensions: 585
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)