Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00510
         (801 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0523 - 18518158-18518442,18518786-18518899,18518994-185192...    75   7e-14
04_04_1332 + 32718584-32718706,32718892-32718960,32719069-327191...    75   9e-14
06_01_0503 - 3596664-3596837,3597647-3598069,3598362-3598595,359...    31   1.4  
01_01_0189 - 1640581-1640832,1640936-1641132,1641243-1641608,164...    30   2.5  
09_04_0126 + 14874739-14875581                                         29   4.3  
11_01_0533 + 4214900-4215162,4215986-4219043,4219613-4221539,422...    29   5.7  
03_01_0125 + 977572-977879,978155-978275,979673-979846,979985-98...    28   9.9  

>10_08_0523 -
           18518158-18518442,18518786-18518899,18518994-18519219,
           18519364-18519470,18519809-18519964,18520100-18520210
          Length = 332

 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 31/76 (40%), Positives = 49/76 (64%)
 Frame = +3

Query: 63  LSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHEYIQN 242
           + R+++LAW+N  LQ   +K+EE  +GA  CQ MD   PG+VPM ++ F    E+E IQN
Sbjct: 15  VGRNEILAWINTTLQLGLSKVEEAASGAVACQLMDAAHPGAVPMHKVNFDAKTEYEMIQN 74

Query: 243 FKILKLVLKRWVWTRY 290
           +K+L+ V  +   T++
Sbjct: 75  YKVLQDVFNKLKITKH 90


>04_04_1332 +
           32718584-32718706,32718892-32718960,32719069-32719155,
           32719865-32719971,32720066-32720187,32720462-32720535,
           32720833-32720946,32721100-32721213
          Length = 269

 Score = 74.5 bits (175), Expect = 9e-14
 Identities = 31/70 (44%), Positives = 47/70 (67%)
 Frame = +3

Query: 63  LSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHEYIQN 242
           + R ++L+W+N  LQ + AK+EE  +GA  CQ MDM+ PG VPM ++ F    E++ IQN
Sbjct: 19  VGRGEILSWINATLQLSLAKVEEAASGAVQCQLMDMVHPGVVPMHKVNFDAKTEYDMIQN 78

Query: 243 FKILKLVLKR 272
           +KIL+ V  +
Sbjct: 79  YKILQDVFNK 88


>06_01_0503 -
           3596664-3596837,3597647-3598069,3598362-3598595,
           3598720-3598993,3599390-3599523,3599572-3599634,
           3599759-3599846,3599919-3599989,3600898-3601010,
           3601836-3602004,3602580-3602671,3602819-3603295,
           3603736-3604090
          Length = 888

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 180 QGTACP*TGNRRHLYTTLRSSQSLTGDNHSPTLAYHAAIDF 58
           QGT+C      RH  T LR++   TG +   +L  H A+D+
Sbjct: 733 QGTSCRGVNWDRHSLTDLRAAVVCTGGHRLASLLRHLALDY 773


>01_01_0189 -
           1640581-1640832,1640936-1641132,1641243-1641608,
           1641826-1642224,1642313-1642719,1642814-1642941
          Length = 582

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -2

Query: 299 QKAIPCPHPSF*NQL*YFKVLYIFMFQICLKFDSFHW-YTAREQHVHELA 153
           QK  P P P+   +  Y ++  +++ QICL +++ +W Y +  +H  ++A
Sbjct: 330 QKLTPKPRPAIGLRDPYPELERVYVAQICLTWEALNWNYASFRRHAGDIA 379


>09_04_0126 + 14874739-14875581
          Length = 280

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +3

Query: 96  DCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHEYI---QNFKILKLV 263
           D L++ FA I E+     Y   MD  FPG V      FK+N +  Y     N  +LKL+
Sbjct: 20  DNLEAEFAVIREIVDDFPYVA-MDTEFPGVVCRPLGTFKSNADFNYATLKANVDMLKLI 77


>11_01_0533 + 4214900-4215162,4215986-4219043,4219613-4221539,
            4221561-4222094,4222388-4222842,4223073-4223189,
            4223319-4223477
          Length = 2170

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 585  SLTLQARRHYCFRAEIGKVTILTHLGYSPTIGSNSMVIYLNKYLSLSHFL 436
            SL L +R +    AE G + ++  L  SP +        L KYL L+H L
Sbjct: 1865 SLVLHSRTNRRAVAEAGGILVVQELLLSPNVDIAGQAALLIKYLFLNHTL 1914


>03_01_0125 +
           977572-977879,978155-978275,979673-979846,979985-980148,
           980245-980332,980426-980479,980571-980651,980895-981068
          Length = 387

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +3

Query: 189 PMKRIKFKTNLEHEYIQNFKILKLVLK 269
           P KRI  +  LEHEY ++ +++++ L+
Sbjct: 310 PNKRITARQALEHEYFKDLEMIQIALR 336


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,173,866
Number of Sequences: 37544
Number of extensions: 367979
Number of successful extensions: 622
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)