Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00509
         (715 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q84K15 Cluster: Putative uncharacterized protein OSJNBa...    36   1.3  
UniRef50_P73700 Cluster: Slr1815 protein; n=4; Cyanobacteria|Rep...    33   7.0  
UniRef50_A7AXF1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_Q84K15 Cluster: Putative uncharacterized protein
           OSJNBa0037J17.9; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0037J17.9 - Oryza sativa subsp. japonica (Rice)
          Length = 190

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 87  TSVKYVFH*TNWYPSAGFEHRCIVTYECTG 176
           T V++VF    W+PS G   RC VT EC G
Sbjct: 67  TDVRWVFGDEKWWPSYGGMQRCRVTLECAG 96


>UniRef50_P73700 Cluster: Slr1815 protein; n=4; Cyanobacteria|Rep:
           Slr1815 protein - Synechocystis sp. (strain PCC 6803)
          Length = 178

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
 Frame = -3

Query: 194 DLKDKTSGAFVCN--NAPVFESRRRVPICLMKYVL-----NRCSRLTSTVKE*HRVIKKT 36
           D+ D+    +VCN  N  +FE    V +    +VL     N    LTST+KE HRV+ + 
Sbjct: 24  DVLDRPEVDYVCNASNLSMFEDNS-VDVIYASHVLEHFYYNIDDELTSTLKEWHRVL-RI 81

Query: 35  GSKLLVS 15
           G KL++S
Sbjct: 82  GGKLMIS 88


>UniRef50_A7AXF1 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 120

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
 Frame = -3

Query: 311 RAHLLVPRIQHNPLRL---LEYTLPKSV*RAEYTVGYIRS---RRDLKDKTSGAFVCNNA 150
           + +L +  I+H+ L +   LEY L  S     Y V YIRS   ++ LK+K    F  N A
Sbjct: 4   KLNLFLNIIKHSALYIEEKLEYVLYISAIILLYIVNYIRSLLVKKSLKEKICDFFYHNRA 63

Query: 149 PVFE 138
           P+F+
Sbjct: 64  PIFQ 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,387,234
Number of Sequences: 1657284
Number of extensions: 13007436
Number of successful extensions: 25133
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25131
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)