Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00509
         (715 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)                    29   4.9  
SB_35622| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_21784| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)                   29   4.9  
SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  

>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 266

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 470 TEFLKAELSGLQTEILAEVFSVVNIHRRGKLG 565
           T FL   +SGL   ++ + F VV  HR+ +LG
Sbjct: 162 THFLSGAISGLFAALITQPFDVVKTHRQIELG 193


>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
          Length = 1136

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 514 IGRGIFCCKHPPKRE 558
           IG+G+FC K PPK E
Sbjct: 412 IGKGLFCTKKPPKAE 426


>SB_35622| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 441

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 514 IGRGIFCCKHPPKRE 558
           IG+G+FC K PPK E
Sbjct: 267 IGKGLFCTKKPPKAE 281


>SB_21784| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 216

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 514 IGRGIFCCKHPPKRE 558
           IG+G+FC K PPK E
Sbjct: 67  IGKGLFCTKKPPKAE 81


>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
          Length = 1487

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 514 IGRGIFCCKHPPKRE 558
           IG+G+FC K PPK E
Sbjct: 388 IGKGLFCTKKPPKAE 402


>SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2021

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 88  HLLSTYFIRQIGTRLRDSNTGALLHTNAPDVLSFRSRRLRI 210
           HL +    ++ GTRL  S TGA++H    +  SF   RLR+
Sbjct: 139 HLCNDDLQKETGTRLY-SLTGAVIHIQPLNFSSFSVERLRV 178


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,834,776
Number of Sequences: 59808
Number of extensions: 424837
Number of successful extensions: 935
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)