Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00509
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53340-5|AAR25650.1|  425|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z66513-14|CAN86619.1|  418|Caenorhabditis elegans Hypothetical p...    28   7.6  
Z66513-13|CAN86618.1|  426|Caenorhabditis elegans Hypothetical p...    28   7.6  
AF299333-1|AAK62992.1|  371|Caenorhabditis elegans phytochelatin...    28   7.6  
AF299332-1|AAK62991.1|  371|Caenorhabditis elegans phytochelatin...    28   7.6  

>U53340-5|AAR25650.1|  425|Caenorhabditis elegans Hypothetical
           protein F02E8.2b protein.
          Length = 425

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 28  LLPVFFITRCYSFTVEVNREHLLSTYFIRQIGTRLRDSNTGALLHTN 168
           +LP+FFI  CY   +    E   ST+    +GT   DS      HT+
Sbjct: 258 VLPLFFIIYCYFRILVTLNEMSNSTHVHTPVGTARSDSGAFPFPHTS 304


>Z66513-14|CAN86619.1|  418|Caenorhabditis elegans Hypothetical
           protein F54D5.1b protein.
          Length = 418

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -1

Query: 568 NSQFPSSVDVYNRKYLCQYLSL*SR--QLCLEKFGSCIKYH 452
           +S F +SV  +N+  LC  L       QLC  KFG C   H
Sbjct: 241 DSDFATSVISWNQFLLCDPLEDDEEEFQLCCRKFGQCFAPH 281


>Z66513-13|CAN86618.1|  426|Caenorhabditis elegans Hypothetical
           protein F54D5.1a protein.
          Length = 426

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -1

Query: 568 NSQFPSSVDVYNRKYLCQYLSL*SR--QLCLEKFGSCIKYH 452
           +S F +SV  +N+  LC  L       QLC  KFG C   H
Sbjct: 249 DSDFATSVISWNQFLLCDPLEDDEEEFQLCCRKFGQCFAPH 289


>AF299333-1|AAK62992.1|  371|Caenorhabditis elegans phytochelatin
           synthase protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -1

Query: 568 NSQFPSSVDVYNRKYLCQYLSL*SR--QLCLEKFGSCIKYH 452
           +S F +SV  +N+  LC  L       QLC  KFG C   H
Sbjct: 241 DSDFATSVISWNQFLLCDPLEDDEEEFQLCCRKFGQCFAPH 281


>AF299332-1|AAK62991.1|  371|Caenorhabditis elegans phytochelatin
           synthase protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -1

Query: 568 NSQFPSSVDVYNRKYLCQYLSL*SR--QLCLEKFGSCIKYH 452
           +S F +SV  +N+  LC  L       QLC  KFG C   H
Sbjct: 241 DSDFATSVISWNQFLLCDPLEDDEEEFQLCCRKFGQCFAPH 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,546,570
Number of Sequences: 27780
Number of extensions: 322833
Number of successful extensions: 676
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)