BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00507 (656 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 111 6e-26 SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 48 1e-06 SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 38 0.001 SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase... 36 0.007 SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 32 0.063 SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 31 0.15 SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 28 1.4 SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.4 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.8 SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 7.3 SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 25 9.6 >SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces pombe|chr 2|||Manual Length = 360 Score = 111 bits (268), Expect = 6e-26 Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 1/164 (0%) Frame = +1 Query: 22 MATDNLTALLYKPNDLRLVQTPIPEISDD-EVLLRMDCVGICGSDVHYWQKGQCGHFVLE 198 MA +L K D + P ++DD +V + + GICGSDVHYW++G G F+L+ Sbjct: 1 MAPAEKAFVLRKKMDTAIEDRPGQTLTDDHQVKVAIKATGICGSDVHYWKEGGIGDFILK 60 Query: 199 EPMIMGHEASGVVAKIGSKSRI*QLVIEWP*SPACRVGTASSVRQDDTTYAPT*SSAPRP 378 +PMI+GHE++GVV ++G + P C R P A P Sbjct: 61 KPMILGHESAGVVVEVGKGVSSLKPGDPVAVEPGCVCRLCDYCRSGRYNLCPHMEFAATP 120 Query: 379 QLHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 510 G L YY DFC KLP +++EEGAL EP++V +HA R Sbjct: 121 PYDGTLRTYYITTEDFCTKLPKQISVEEGALFEPMSVAVHAMTR 164 Score = 92.7 bits (220), Expect = 4e-20 Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Frame = +3 Query: 255 VKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPVTRKPRQILQARSRFLLQ 434 V +L GD VA+EPG CR C++C++GRY+LCP M F ATPP R F + Sbjct: 80 VSSLKPGDPVAVEPGCVCRLCDYCRSGRYNLCPHMEFAATPPYDGTLRTYYITTEDFCTK 139 Query: 435 AS*SRDHGRRSATGAPRG-GHSRVQEGGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVL 611 + A P + G + G VLV+G G +GLL M AKA+GA ++ Sbjct: 140 LP-KQISVEEGALFEPMSVAVHAMTRGNLKCGSRVLVMGCGTVGLLMMAVAKAYGAIDIV 198 Query: 612 IIDILQSRLDFAK 650 +D SR++FA+ Sbjct: 199 AVDASPSRVEFAQ 211 >SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharomyces pombe|chr 3|||Manual Length = 350 Score = 48.0 bits (109), Expect = 1e-06 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Frame = +1 Query: 58 PNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVL--EEPMIMGHEASG 231 P +++ + P+ E DEVL+ + G+C +D+H Q G + L + P+I GHE +G Sbjct: 18 PENVKFEEVPVAEPGQDEVLVNIKYTGVCHTDLHALQ----GDWPLPAKMPLIGGHEGAG 73 Query: 232 VVAKIGS 252 VV K+G+ Sbjct: 74 VVVKVGA 80 Score = 30.7 bits (66), Expect = 0.19 Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 3/136 (2%) Frame = +3 Query: 255 VKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLCPDMIFCA-TPPVTRKPRQILQARSRFL 428 V L +GDRV ++ C CE+C +CP + T T + I A + Sbjct: 82 VTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQLSGYTVDGTFQHYCIANATHATI 141 Query: 429 LQAS*SRDHGRRSATGAPRGGHSRVQEGGVSAGHVVLVLGA-GPIGLLTMLTAKAFGAHK 605 + S + A + ++E V G + + GA G +G L + AKA A + Sbjct: 142 IPESVPLEVA-APIMCAGITCYRALKESKVGPGEWICIPGAGGGLGHLAVQYAKAM-AMR 199 Query: 606 VLIIDILQSRLDFAKS 653 V+ ID + + KS Sbjct: 200 VVAIDTGDDKAELVKS 215 >SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase |Schizosaccharomyces pombe|chr 2|||Manual Length = 423 Score = 38.3 bits (85), Expect = 0.001 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 252 EVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 350 EV NL +GDRV I + C C FCK Y C Sbjct: 109 EVNNLEIGDRVVIAFDLACGQCSFCKRHEYAAC 141 Score = 37.9 bits (84), Expect = 0.001 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = +3 Query: 510 GGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAK 650 G V G V + G GPIGL A+ GA KV+ I+++ R++ A+ Sbjct: 217 GEVKKGDTVAIWGMGPIGLYAGRWAQILGASKVIGIEVVPERIELAR 263 Score = 36.3 bits (80), Expect = 0.004 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Frame = +1 Query: 58 PNDLRLVQTPIPEISDD-EVLLRMDCVGIC-GSDVHYWQKGQCGHFVLEEPMIMGHEASG 231 P ++++ + P P I+ +V+++ IC GSD H + G +E+ I+GHE+ G Sbjct: 45 PLNVKIAEVPKPTITHPKDVIVKTTACTICSGSDSHIFSGEMPG---IEKGAILGHESCG 101 Query: 232 VVAKIGSK 255 +VA+ G + Sbjct: 102 IVAEKGDE 109 >SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase |Schizosaccharomyces pombe|chr 2|||Manual Length = 378 Score = 35.5 bits (78), Expect = 0.007 Identities = 20/59 (33%), Positives = 29/59 (49%) Frame = +3 Query: 474 GAPRGGHSRVQEGGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAK 650 G G + V +G V V+G G +GL M A A GA +++ IDI + +AK Sbjct: 177 GVTTGFGAVTHSAKVESGSTVAVVGCGCVGLAAMQGAVAAGASRIIAIDINADKEVYAK 235 Score = 31.5 bits (68), Expect = 0.11 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +3 Query: 255 VKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 350 V N+ GD V + C+ C+FC++G+ +LC Sbjct: 82 VINVRPGDHVILLYTPECKECKFCRSGKTNLC 113 Score = 28.3 bits (60), Expect = 1.0 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +1 Query: 109 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIG 249 EV +++D +C +D Y G P+++GHE +G+V IG Sbjct: 36 EVRVKVDWSAVCHTDA-YTLSGVDPEGAF--PIVLGHEGAGIVESIG 79 >SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual Length = 380 Score = 32.3 bits (70), Expect = 0.063 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 252 EVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 350 +V + VGD V C+ C+FCK+G+ +LC Sbjct: 84 QVTTVQVGDPVIALYTPECKTCKFCKSGKTNLC 116 Score = 29.1 bits (62), Expect = 0.59 Identities = 19/64 (29%), Positives = 33/64 (51%) Frame = +1 Query: 58 PNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 237 P + VQ P + EV +++ G+C +D Y G+ + P+I+GHE +G+V Sbjct: 24 PLSIENVQVFPPRVH--EVRIKIVNSGVCHTDA-YTLSGKDPEGLF--PVILGHEGAGIV 78 Query: 238 AKIG 249 +G Sbjct: 79 ESVG 82 >SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe|chr 2|||Manual Length = 346 Score = 31.1 bits (67), Expect = 0.15 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +3 Query: 504 QEGGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKSL 656 +E V G+ VLVLG G + + A A GA+ V + +L+FAK L Sbjct: 159 KEHQVKPGNNVLVLGTGGVSTFALQFALAAGAN-VTVTSSSDEKLEFAKKL 208 >SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 204 Score = 27.9 bits (59), Expect = 1.4 Identities = 15/46 (32%), Positives = 18/46 (39%) Frame = -2 Query: 604 LCAPKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRECPPRGAPVA 467 L P +V P GP PS S + TP + P AP A Sbjct: 45 LTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAA 90 >SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 574 Score = 27.9 bits (59), Expect = 1.4 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = -2 Query: 562 PMGPAPSTSTTCPAETPPSCTRECPPRGAPVA 467 P+G A TST P TPPS PP P A Sbjct: 405 PLGNASRTSTP-PVPTPPSLPPSAPPSLPPSA 435 Score = 25.8 bits (54), Expect = 5.5 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 3/51 (5%) Frame = -2 Query: 598 APKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRECP---PRGAPVALLLP 455 AP + R P T + P PPS P P GAP A LP Sbjct: 400 APALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 27.5 bits (58), Expect = 1.8 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Frame = -2 Query: 619 SIMSTLCAPKALAVSMVRRPMGPAPSTSTTCPAET--PPSCTRECP 488 S ST P + S P PSTST+C T PP+ P Sbjct: 309 STSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTP 354 >SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr 1|||Manual Length = 625 Score = 25.4 bits (53), Expect = 7.3 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Frame = -2 Query: 337 RPVLQNSQYRHGTPGSMATRS----PTVRFLTSNRSWPLLLKLRVP*SLVLPARSVRIDP 170 R +L+N Q R G+ TRS P +RF N + PLL RV VL I Sbjct: 338 RYILENGQSRPDRTGT-GTRSVFAPPQLRFSLRNNTLPLLTTKRVFLRGVLEELLWFIHG 396 Query: 169 SASSGHLTRR 140 ++ HL+ + Sbjct: 397 DTNANHLSEK 406 >SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 298 Score = 25.0 bits (52), Expect = 9.6 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Frame = +3 Query: 336 RYHLCPDMIFCATPPVTRKPRQILQARSRFLLQAS*SRDHGRRSATGAPRGGHSRVQEGG 515 R H P TP + +A+S + A G S GG++R + G Sbjct: 12 RAHAVPSQDATTTPDNANNVPKEPRAQSMISIAADDLNQEGEMSDDNQQEGGNNRTSQNG 71 Query: 516 V--SAGH 530 S+GH Sbjct: 72 TSGSSGH 78 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,830,061 Number of Sequences: 5004 Number of extensions: 57257 Number of successful extensions: 202 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 198 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 297805304 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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