BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00507
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 79 3e-15
04_03_0562 + 17190443-17190520,17190715-17190853,17190943-171910... 42 4e-04
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 42 6e-04
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 41 8e-04
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 41 0.001
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 39 0.004
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 39 0.004
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 38 0.005
11_06_0432 + 23448482-23448570,23448987-23449100,23449514-234495... 38 0.009
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 37 0.016
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 36 0.021
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 36 0.021
10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 36 0.028
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 36 0.028
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 36 0.037
04_02_0018 - 8595479-8595678,8595782-8595935,8596396-8597032,859... 35 0.050
09_04_0030 + 13940168-13940250,13940703-13941714 35 0.066
09_04_0029 - 13932414-13933416,13933821-13933903 35 0.066
09_04_0028 - 13928542-13929538,13929736-13929818 35 0.066
04_03_0559 + 17118319-17118396,17119329-17119467,17119569-171196... 35 0.066
07_03_1507 - 27228032-27228742 34 0.087
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 34 0.11
03_01_0012 - 101584-101898,102274-102531,102932-103474 34 0.11
09_04_0031 + 13946692-13946774,13947007-13948012 33 0.15
08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 33 0.20
06_03_1023 - 26952195-26952635,26952723-26952934,26953038-269537... 33 0.20
05_07_0291 - 29020032-29020660,29020747-29020817,29021020-290211... 33 0.20
03_05_1024 + 29802831-29804208,29804710-29804759,29805569-298059... 32 0.35
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 32 0.35
04_03_0566 + 17209455-17209565,17210159-17210203,17211456-172115... 32 0.46
06_03_1146 - 28004896-28005554,28005664-28005844 31 0.61
03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 31 0.61
06_03_0215 - 18080286-18080914,18080925-18080997 31 0.81
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 30 1.4
09_04_0641 + 19172370-19172459,19172539-19172680,19172951-191730... 30 1.9
09_04_0636 + 19150966-19151037,19151150-19151291,19151404-191514... 30 1.9
01_06_0372 + 28828552-28829913 30 1.9
04_03_0629 + 18179065-18179148,18180146-18180287,18180987-181810... 29 2.5
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 29 2.5
05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563 29 3.3
12_02_0067 + 13144002-13144203,13144471-13144529,13144638-131447... 29 4.3
06_01_1121 + 9232333-9232857,9233383-9234174 29 4.3
04_01_0263 - 3532481-3532656,3532710-3532719,3532754-3532785,353... 29 4.3
01_01_1197 - 9630506-9630681,9630774-9630805,9630894-9630988,963... 29 4.3
07_01_1069 - 9493001-9493176,9493269-9493300,9493405-9493499,949... 28 5.7
06_03_0905 + 25843547-25844314 28 5.7
06_03_0219 - 18227559-18227858,18227864-18228340 28 5.7
05_06_0086 - 25447063-25447182,25448082-25448702 28 5.7
05_05_0022 + 21592403-21593083,21593720-21594208 28 5.7
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 28 5.7
02_05_0692 + 30973171-30973908 28 5.7
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 28 7.5
06_03_1067 - 27326167-27326295,27326572-27326656,27326993-273270... 28 7.5
10_08_0143 + 15174605-15174725,15175252-15175682 27 9.9
07_03_0035 - 12677942-12678568 27 9.9
05_05_0392 + 24629528-24630442 27 9.9
04_04_0057 + 22410167-22411330 27 9.9
02_05_0642 + 30576158-30576289,30576436-30576503,30577167-305774... 27 9.9
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 79.0 bits (186), Expect = 3e-15
Identities = 32/74 (43%), Positives = 52/74 (70%)
Frame = +1
Query: 31 DNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMI 210
+N+ A L N L+++ +P + +V +RM VGICGSDVHY ++ + HFV++EPM+
Sbjct: 22 ENMAAWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMV 81
Query: 211 MGHEASGVVAKIGS 252
+GHE +GV+ ++GS
Sbjct: 82 IGHECAGVIEEVGS 95
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +3
Query: 255 VKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPV 383
V +L VGDRVA+EPG+ C C CK GRY+LC DM F ATPPV
Sbjct: 97 VTHLAVGDRVALEPGISCWRCRHCKGGRYNLCEDMKFFATPPV 139
Score = 60.5 bits (140), Expect = 1e-09
Identities = 23/40 (57%), Positives = 33/40 (82%)
Frame = +1
Query: 412 HAADFCFKLPDHVTMEEGALLEPLAVGIHACKRAESRRDT 531
H D CFKLP++V++EEGA+ EPL+VG+HAC+RA+ +T
Sbjct: 172 HPGDLCFKLPENVSLEEGAMCEPLSVGVHACRRADVGPET 211
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/41 (58%), Positives = 35/41 (85%)
Frame = +3
Query: 534 VLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKSL 656
VL++GAGPIGL+T+L A+AFGA +V+I+D+ + RL A+SL
Sbjct: 213 VLIMGAGPIGLVTLLAARAFGATRVVIVDVDEHRLSVARSL 253
>04_03_0562 +
17190443-17190520,17190715-17190853,17190943-17191034,
17191681-17191989,17192817-17193506
Length = 435
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 67 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 246
L+ V+ P+P + DEVL++++ I SD+ QKG F + P I + SG + ++
Sbjct: 25 LKFVEIPVPSVKKDEVLVKVEAASINQSDL-MTQKGMMRPFHPKFPFIPVNNVSGEIVEV 83
Query: 247 GSKSR 261
GS R
Sbjct: 84 GSAVR 88
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 522 AGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKSL 656
AG V V+G G +G + AKAFGA +V+ +D+L +L A++L
Sbjct: 239 AGDSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLQNARTL 283
Score = 35.1 bits (77), Expect = 0.050
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 43 ALLYKPN-DLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGH 219
A+ ++P L L +P E+L++ G+C SD+H + G P ++GH
Sbjct: 53 AVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLK----GELPFSSPCVVGH 108
Query: 220 EASGVVAKIGS 252
E +G V G+
Sbjct: 109 EITGEVVDHGT 119
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 55 KPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 231
KP + V+ P+ EV L++ +C +DV++W+ KGQ F P I GHEA G
Sbjct: 20 KPLSIEEVEVAPPQAM--EVRLKILYTALCHTDVYFWEAKGQTPVF----PRIFGHEAGG 73
Query: 232 VVAKIG 249
+V +G
Sbjct: 74 IVESVG 79
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 55 KPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 231
KP + V+ P+ EV +++ +C +DV++W+ KGQ F P I+GHEA G
Sbjct: 20 KPLSIEEVEVAPPQAM--EVRVKILYTALCHTDVYFWEAKGQTPVF----PRILGHEAGG 73
Query: 232 VVAKIG 249
+V +G
Sbjct: 74 IVESVG 79
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 55 KPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 231
KP + V+ P+ EV +++ +C +DV++W+ KGQ F P I GHEA G
Sbjct: 20 KPLVIEEVEVAPPQAM--EVRVKILFTSLCHTDVYFWEAKGQTPVF----PRIFGHEAGG 73
Query: 232 VVAKIG 249
+V +G
Sbjct: 74 IVESVG 79
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 525 GHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAK 650
G V + G G +GL A+ GA +++ ID+ +R + A+
Sbjct: 195 GSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEAR 236
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +1
Query: 103 DDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIG 249
DD+V +++ GIC SD+H K + H + P++ GHE +GVV ++G
Sbjct: 40 DDDVAIKILFCGICHSDLHCI-KNEWKHSIY--PLVPGHEIAGVVTEVG 85
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +3
Query: 258 KNLT---VGDRVAIEPGV-PCRYCEFCKTGRYHLCPDMIF 365
KN+T GDRV + V CR CE C G + CP+ +F
Sbjct: 86 KNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVF 125
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 516 VSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKS 653
V AG +V + G G +GL AK+ GA +++ IDI + D AK+
Sbjct: 194 VEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKN 239
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 55 KPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 231
+P + VQ P+ EV +++ +C +D + W K G F P I+GHEA+G
Sbjct: 22 RPMTIEDVQVAPPQAG--EVRVKILFTALCHTDHYTWSGKDPEGLF----PCILGHEAAG 75
Query: 232 VVAKIG 249
+V +G
Sbjct: 76 IVESVG 81
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 255 VKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 350
V + GD V CR C+FCK+G+ +LC
Sbjct: 84 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLC 115
>11_06_0432 +
23448482-23448570,23448987-23449100,23449514-23449580,
23449614-23449741,23452786-23453071,23453264-23453414,
23453603-23453799
Length = 343
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +1
Query: 94 EISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGS 252
E+ ++V LR+ G+C +DV W + + P++ GHE +GVV ++G+
Sbjct: 31 EVQSEDVSLRITHCGVCYADV-IWTRNMFNDSIY--PLVPGHEIAGVVTEVGA 80
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 109 EVLLRMDCVGICGSDVHYWQK-GQCGHFVLEEPMIMGHEASGVVAKIG 249
E+ +++ IC SDV WQ Q F P I GHEASGVV +G
Sbjct: 652 EIRVKVVSTSICRSDVTQWQSTAQTDLF----PRIFGHEASGVVESVG 695
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +1
Query: 103 DDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIG 249
DD+V +++ GIC SD+H K + + V P++ GHE +GVV ++G
Sbjct: 47 DDDVAIKVLYCGICHSDLHTI-KNEWRNAVY--PVVAGHEITGVVTEVG 92
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/56 (35%), Positives = 35/56 (62%)
Frame = +1
Query: 85 PIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGS 252
P+ D++V++++ GIC SD+ K + G+ + P++ GHE GVVA++GS
Sbjct: 26 PLRAKGDEDVVVKILFCGICHSDLSTI-KNEWGN--AKYPVVPGHEIVGVVAEVGS 78
>10_02_0173 +
6191676-6191764,6192147-6192260,6192411-6192638,
6192898-6193183,6193350-6193500,6193615-6193811
Length = 354
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +1
Query: 97 ISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGS 252
+ D+V LR+ G+C +DV W + + + P++ GHE +GVV ++G+
Sbjct: 32 VQSDDVSLRITHCGVCYADVA-WTRNILNNSMY--PLVPGHEIAGVVTEVGA 80
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 109 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIG 249
E+ +++ C +C +DV W K P I+GHEA GVV +G
Sbjct: 37 EIRIKIICTSLCHTDVTLWHKVDPAF-----PRILGHEAYGVVESVG 78
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 109 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIG 249
EV L++ IC +D+ W KG+ + P I+GHEA+GVV +G
Sbjct: 53 EVRLKVLFTSICHTDLSAW-KGE-NELQRKFPRILGHEAAGVVESVG 97
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 474 GAPRGGHSRVQEGGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDI 623
G G + VS G V + G G IGL A+ GA +++ +DI
Sbjct: 202 GVSTGVGAAWNTANVSKGSTVAIFGLGAIGLAVAEGARLRGASRIIGVDI 251
>04_02_0018 -
8595479-8595678,8595782-8595935,8596396-8597032,
8597126-8597217
Length = 360
Score = 35.1 bits (77), Expect = 0.050
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 106 DEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGS 252
D+V +++ G+C +D+H+ G + P++ GHE +GVV K+G+
Sbjct: 36 DDVTIKVKYCGMCHTDLHFIHN-DWG--ITMYPVVPGHEITGVVTKVGT 81
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 103 DDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGS 252
DD+V +++ GIC +D+H K G+ + P++ GHE GVV +G+
Sbjct: 32 DDDVTIKVLYCGICHTDLHI-VKNDWGNAMY--PVVPGHEIVGVVTGVGA 78
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 103 DDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGS 252
DD+V +++ GIC +D+H K G+ + P++ GHE GVV +G+
Sbjct: 32 DDDVTIKVLYCGICHTDLHV-VKNDWGNAMY--PVVPGHEIVGVVTGVGA 78
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +1
Query: 103 DDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGS 252
+D+V +++ GIC +D+H K + G+ + P++ GHE GVVA +G+
Sbjct: 32 EDDVTIKVLYCGICHTDLHTI-KNEWGNAMY--PVVPGHEIVGVVAGVGA 78
>04_03_0559 +
17118319-17118396,17119329-17119467,17119569-17119660,
17119974-17120660
Length = 331
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 67 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 246
L+ V+ P+P + +E+L++++ + +D QKG F + P I + SG V ++
Sbjct: 25 LKFVEIPVPSLKKNEILIKIEAASLNQADWRI-QKGLMRPFHPKFPFIPVTDVSGEVIEV 83
Query: 247 GS 252
GS
Sbjct: 84 GS 85
>07_03_1507 - 27228032-27228742
Length = 236
Score = 34.3 bits (75), Expect = 0.087
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 598 APKALAVSMVRRPMGPAPSTSTTCPAETPP--SCTRECPPRGAPVALLLPWSR 446
AP L R+P PA + P PP +C+R RGA LPW+R
Sbjct: 174 APSRLPSGPGRQPPAPAGAADAWDPQRRPPPAACSRSTVDRGADAWAPLPWTR 226
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1
Query: 103 DDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIG 249
DD+V++++ GIC SD+H K + + P++ GHE +GVV + G
Sbjct: 30 DDDVVIKILYCGICHSDLHS-IKNEWKNATY--PLVPGHEIAGVVTEAG 75
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 58 PNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 237
P LR Q + E + E+ ++ +G+ DV+Y Q G + P + G EA GVV
Sbjct: 58 PEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQ----GVYSAPLPFVPGREAVGVV 113
Query: 238 AKIG 249
+G
Sbjct: 114 TAVG 117
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 103 DDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGS 252
+D+V +++ GIC +D+H K + G+ + P++ GHE GVV +G+
Sbjct: 32 EDDVTIKVLYCGICHTDLHII-KNEWGNAMY--PVVPGHEIVGVVTGVGA 78
>08_02_0503 -
17848739-17849004,17849109-17849268,17849368-17849691,
17849787-17850209
Length = 390
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +1
Query: 88 IPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE---PMIMGHEASGVVAKIGSK 255
+P+I+DD+VL+R+ + D K + G F + P + G++ +GVV K G K
Sbjct: 104 VPDIADDQVLVRVAAAALNPVDA----KRRAGKFKATDSPLPTVPGYDVAGVVVKAGRK 158
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +3
Query: 456 GRRSATGAPRG---GHSRVQEGGVSAGHVVLVL-GAGPIGLLTMLTAK-AFGAHKVLIID 620
G A G P H ++ G SAG +L+L GAG +G L + AK +GA KV
Sbjct: 205 GFAQAAGLPLAIETAHEGLERAGFSAGKSILILGGAGGVGSLAIQLAKHVYGASKV-AAT 263
Query: 621 ILQSRLDFAKSL 656
+L+ KSL
Sbjct: 264 ASTPKLELLKSL 275
>06_03_1023 -
26952195-26952635,26952723-26952934,26953038-26953757,
26955042-26955735
Length = 688
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 120 AHGLRGYLRVRCPLLAEGSMRTLRAGRTNDHGTRSFRSSGQDRFEVKNL 266
AHG G + P + ++ R GR +DHG F G++RFE+++L
Sbjct: 334 AHGGGGGGGEQQPHVTVSAVPAKRGGRRDDHGRLVFIQEGRERFELEDL 382
>05_07_0291 -
29020032-29020660,29020747-29020817,29021020-29021194,
29021451-29021571,29021686-29022036
Length = 448
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 625 RISIMSTLCAPKALAVSMVRRPMGPAPSTSTTCPAETPP 509
R+S+ + A A+AV+++ P+ A TTCPA+ PP
Sbjct: 6 RLSLAAAAAAALAVAVALLLPPLAAAQG-ETTCPADVPP 43
>03_05_1024 +
29802831-29804208,29804710-29804759,29805569-29805954,
29807753-29807813,29807921-29807941
Length = 631
Score = 32.3 bits (70), Expect = 0.35
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +3
Query: 273 GDRVAIEPGVPCRYCEFCKTGRYHLCPDMI-FCATPPVTRKPRQILQARSRFLLQAS*SR 449
GD EPG + E G ++ +M F + PP ++L + Q + +
Sbjct: 117 GDEHGAEPGAMYDHAEAAAAGASNMLSEMFNFPSQPPTGPSATELLAS------QMNANY 170
Query: 450 DHGRRSATGAPRGGHSRVQEGGVSAGHVVLVLGAGPIGLL 569
G R A G GG GG +AG LVLG +G L
Sbjct: 171 RFGFRQAAGLA-GGEGGWFGGGGAAGRTGLVLGGASLGSL 209
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 106 DEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIG 249
++V++++ GIC +D+H K G + PM+ GHE G V ++G
Sbjct: 35 EDVVVKVLYCGICHTDIHQ-AKNHLG--ASKYPMVPGHEVVGEVVEVG 79
>04_03_0566 +
17209455-17209565,17210159-17210203,17211456-17211569,
17211943-17212081,17212324-17212415,17213245-17213517
Length = 257
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 67 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 246
L+ V+ P+P + EVL++++ + D QKG F+ + P I + +G + +
Sbjct: 89 LKHVEIPVPSVKKHEVLIKVEAASVNPIDWSI-QKGMLRPFLPKFPFIPVTDVAGEIVEA 147
Query: 247 GS 252
GS
Sbjct: 148 GS 149
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 598 APKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRECPPRGAPVA 467
A +LA S V P+PS S PA P + T PP A +A
Sbjct: 172 ATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMA 215
>03_01_0635 -
4660692-4660737,4660783-4660829,4661371-4661507,
4661661-4661697
Length = 88
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 109 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASG 231
EV +++ C +C SDV +W+ F P I GHEA G
Sbjct: 37 EVRIKIVCTSLCHSDVTFWRMQD---FPGVFPRIFGHEAFG 74
>06_03_0215 - 18080286-18080914,18080925-18080997
Length = 233
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -2
Query: 598 APKALAVSMVRRPMGPAPSTSTTCPAETPP--SCTRECPPRGAPVALLLPWSR 446
A + V R+P PA + P PP +CTR R A LPW+R
Sbjct: 171 ASRGCQVGPGRQPPAPAGAADAWDPRRRPPPAACTRSTVDREADAWAPLPWTR 223
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -2
Query: 595 PKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRECPPRGAPVALLLPWSRDQE 437
P + + P A TT A +PPS PP P + P + D E
Sbjct: 57 PTPIPPARAATPSSQADDVPTTTTATSPPSSAPSSPPSSPPAESVPPTAADSE 109
>09_04_0641 +
19172370-19172459,19172539-19172680,19172951-19173039,
19173096-19173806
Length = 343
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 67 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFV-LEEPMIMGHEASGVVAK 243
L+ V+ PIP EVL++M+ I D QKG F+ + P I + +G VA
Sbjct: 29 LKHVEVPIPSPKKGEVLIKMEAASINPIDWKI-QKGMLRPFLPWKFPSIPACDLAGKVAA 87
Query: 244 IGSKSR 261
+G R
Sbjct: 88 VGGGVR 93
>09_04_0636 +
19150966-19151037,19151150-19151291,19151404-19151492,
19151589-19152308
Length = 340
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 67 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE-PMIMGHEASGVVAK 243
L+ V+ PIP EVL++M+ I D + QKG F+ + P I ++ +G V +
Sbjct: 23 LKHVEVPIPTPKKGEVLIKMEAGSINQVDWKF-QKGVARPFMPNKFPFIPVYDLAGEVVE 81
Query: 244 IG 249
+G
Sbjct: 82 LG 83
>01_06_0372 + 28828552-28829913
Length = 453
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 507 EGGVSAGHVVLVLGAGPIGLLTMLTAKAFG 596
EGG G ++ LG G + L+T L +AFG
Sbjct: 219 EGGFGTGSGLVGLGRGKLSLVTQLNVEAFG 248
>04_03_0629 +
18179065-18179148,18180146-18180287,18180987-18181078,
18181272-18181964
Length = 336
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 67 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE-PMIMGHEASGVVAK 243
L+ V+ P+P +EVLL+++ I D QKG + P I + +GVVA
Sbjct: 27 LKHVEVPVPSAKKNEVLLKLEAATINPVDWKI-QKGMLRPLLPRRLPFIPVTDVAGVVAG 85
Query: 244 IG 249
+G
Sbjct: 86 VG 87
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 583 AVSMVRRPMGPAPSTSTTCPAETPPSCTRECPPRGAP-VALLLP 455
A + R P P PST+T P P+ T PP P VA+ P
Sbjct: 63 AAASSRPPRPPPPSTTTAPPPPAAPAVTPARPPPQQPAVAVAAP 106
>05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563
Length = 571
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = -2
Query: 307 HGTPGSMATRSPTVRFLTSNRSWPLLLKLRVP*SLVLPARSVRIDPSASSGHLTRRYP 134
HG G PT++ + SW L +L S L + R P SGH RYP
Sbjct: 60 HGA-GHFTVARPTLQIAYQDLSWTALRRLAHDYSHRLGGSAFRQLPRLPSGHSDARYP 116
>12_02_0067 +
13144002-13144203,13144471-13144529,13144638-13144713,
13144802-13144873,13144969-13145056,13145365-13145601,
13145705-13145910,13145946-13146122,13146220-13146251,
13146330-13146432,13146547-13146815,13148029-13148175,
13148272-13148412,13148509-13148595,13148841-13148931,
13149093-13149192,13149292-13149352,13149442-13149663,
13149756-13149872,13149972-13150061,13150168-13150344
Length = 917
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 382 LHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIH 498
LH +VR + ADFCFK H + EP + H
Sbjct: 161 LHPRIVRDFVRFADFCFKTYGHKVKNWFTINEPRMMANH 199
>06_01_1121 + 9232333-9232857,9233383-9234174
Length = 438
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 538 STTCPAETPPSCTRECPPRGAPVALLLPWSRD 443
+T+ P+ PP+ +R PP P+A++ RD
Sbjct: 47 ATSLPSAAPPAYSRSAPPSPTPLAVVARVPRD 78
>04_01_0263 -
3532481-3532656,3532710-3532719,3532754-3532785,
3533237-3533348,3533586-3533649,3533778-3533843,
3533946-3534073,3534205-3534342,3534427-3534539,
3534611-3534776,3535045-3535107,3535197-3535304,
3535408-3535524,3535620-3535785,3535942-3536039,
3536136-3536233,3536378-3536514,3536654-3536878,
3536971-3537176,3537286-3537525
Length = 820
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 307 HGTPGSMATRSPTVRFLTSNRSWPLLLKLR 218
HG PG + P++ + S+R WPL+ K R
Sbjct: 612 HGQPGQ--SDRPSIAAVVSSRQWPLISKYR 639
>01_01_1197 -
9630506-9630681,9630774-9630805,9630894-9630988,
9631569-9631642,9631732-9631843,9631967-9632030,
9632210-9632275,9632396-9632526,9632884-9633021,
9633115-9633227,9633306-9633471,9633588-9633701,
9633791-9633853,9633953-9634060,9634143-9634259,
9634343-9634505,9634646-9634743,9634852-9634949,
9635054-9635190,9635309-9635530,9635625-9635830,
9636758-9636845,9638085-9638668
Length = 1054
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 307 HGTPGSMATRSPTVRFLTSNRSWPLLLKLR 218
HG+PG + P++ + S+R WPL+ K R
Sbjct: 792 HGSPGQ--SDIPSIAAVVSSREWPLVSKYR 819
>07_01_1069 -
9493001-9493176,9493269-9493300,9493405-9493499,
9493623-9493898,9493976-9494039,9498048-9498113,
9498283-9498413,9499722-9499859,9499964-9500079,
9500166-9500331,9500435-9500548,9500609-9500692,
9500995-9501073,9501134-9501337,9501999-9502096,
9502187-9502284,9502359-9502495,9502606-9502824,
9503541-9503743,9503856-9504005
Length = 881
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Frame = -2
Query: 379 GGVAQKIMSGHRWYRPVLQNS-------QYRHGTPGSMATRSPTVRFLTSNRSWPLLLKL 221
GG+ K+ HR P++ + HG+PG P++ + +R WPL+ +
Sbjct: 558 GGMNSKLSLEHRHMIPIVNQTPTLILGMDVSHGSPGRADV--PSIAAVVGSRCWPLISRY 615
Query: 220 R 218
R
Sbjct: 616 R 616
>06_03_0905 + 25843547-25844314
Length = 255
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 553 PAPSTSTTCPAETPPSCTRECP 488
P P T+T CP PP T+ CP
Sbjct: 154 PTPPTTTPCPP--PPPATQRCP 173
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 595 PKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRECPPR 482
P A A S VRRP P+P ++ P PP P R
Sbjct: 78 PAACAASTVRRPAAPSPPPAS--PPPPPPRLALRFPRR 113
>05_06_0086 - 25447063-25447182,25448082-25448702
Length = 246
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 456 GRRSATGAPRGGHSRVQEGGVSAG 527
GR S TGA RGGH GG +G
Sbjct: 4 GRHSLTGAVRGGHGSEVWGGGGSG 27
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 553 PAPSTSTTCPAETPPSCTRECPPRGAPVALLLP 455
P PS S++ T S T + PRGA L LP
Sbjct: 34 PPPSPSSSSTTTTSSSLTAQRQPRGAGTMLCLP 66
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 553 PAPSTSTTCPAETPPSCTRECPPRGAPV 470
P+P S++ P PS PPR APV
Sbjct: 121 PSPRVSSSSPRSPTPSPPSSSPPRPAPV 148
>02_05_0692 + 30973171-30973908
Length = 245
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 375 PPVTR-KPRQILQARSRFLLQAS*SRDHGRRSATGAPRGGHSRVQEGGVSAGHVVLVLGA 551
P V R +PR Q R ++LL R G ++G G H R + GG+ G +V +
Sbjct: 45 PSVWRQRPRSSSQRRRQWLLWHGVRRRGGAFGSSGCGCGDHGRRRHGGL--GRLVEGVAN 102
Query: 552 GPIG 563
G IG
Sbjct: 103 GYIG 106
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 625 RISIMSTLCAPKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRECPP 485
RI ++ A + +M +RP P + P TPP+ T PP
Sbjct: 3 RIVLVVAFAAVVVVQAAMAQRPGMPPAVVPPSLPTTTPPAPTVVAPP 49
>06_03_1067 - 27326167-27326295,27326572-27326656,27326993-27327033,
27327274-27327333,27327843-27327962,27328842-27329114,
27329186-27329257,27329798-27329860,27329957-27330139,
27330544-27330660,27330734-27332683,27332770-27332907,
27333003-27333284,27334650-27335522
Length = 1461
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 580 VSMVRRPMGPAPSTSTTCPAETPPSCTRECPPRGAPV 470
+ +VRRP P + P PPS E RG P+
Sbjct: 971 IPLVRRPPSPVVLSVPRVPRPPPPSPVGESRKRGFPI 1007
>10_08_0143 + 15174605-15174725,15175252-15175682
Length = 183
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 456 GRRSATGAPRGGHSRVQEGGVSAGHVVLVL 545
GRR A A RGGH Q G + H +VL
Sbjct: 132 GRRRAAAARRGGHPAWQLAGALSRHRQVVL 161
>07_03_0035 - 12677942-12678568
Length = 208
Score = 27.5 bits (58), Expect = 9.9
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 352 GHRWYRPVLQNSQYRHGTP-GSMATRSPTVRFLTSNRSWPLLLKLRVP*SLVLPARSVRI 176
G RW+R G++ SPT +NR W LL R+P L LPA
Sbjct: 85 GRRWWRASCSGGVVASPARFGAVMLASPTA----ANR-WFLLRPARLPLPLALPAAHA-- 137
Query: 175 DPSASSGHLTRRYPRSP 125
P L R PR P
Sbjct: 138 -PRRRQPRLCHRVPRRP 153
>05_05_0392 + 24629528-24630442
Length = 304
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 553 PAPSTSTTCPAETPPSCTRECPPRGA 476
PA ST+TT PP C+ PP+ A
Sbjct: 244 PASSTTTTQSRGPPPHCSSPPPPQDA 269
>04_04_0057 + 22410167-22411330
Length = 387
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 562 PMGPAPSTSTTCPA-ETPPSCTRECPPRGAPVALLLPWSRDQE 437
P P P+ + P+ E P C PP P AL++P +++
Sbjct: 184 PPPPPPAAAAASPSPERSPRCQPSPPPPPPPHALVIPVEDEED 226
>02_05_0642 +
30576158-30576289,30576436-30576503,30577167-30577487,
30578318-30579146
Length = 449
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 547 PSTSTTCPAETPPSCTRECPP 485
PSTS+ P PP+C+ PP
Sbjct: 9 PSTSSPYPLLAPPTCSSRLPP 29
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,380,391
Number of Sequences: 37544
Number of extensions: 473075
Number of successful extensions: 2075
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2048
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -