Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00507
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 141 4e-34
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 34 0.12
SB_27978| Best HMM Match : HycH (HMM E-Value=0.12) 32 0.47
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_28920| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.24) 29 3.3
SB_19910| Best HMM Match : C1_4 (HMM E-Value=3.2) 29 3.3
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 28 5.8
SB_42197| Best HMM Match : rve (HMM E-Value=0.017) 28 7.7
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_54044| Best HMM Match : PARP (HMM E-Value=0.078) 28 7.7
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 28 7.7
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 141 bits (342), Expect = 4e-34
Identities = 79/164 (48%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Frame = +1
Query: 31 DNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMI 210
DNL A+L+ +DLRLVQ V + M VGICGSDVHYW+ G G FVL PM+
Sbjct: 5 DNLAAVLHGIDDLRLVQ----------VQISMHTVGICGSDVHYWKHGCIGDFVLTAPMV 54
Query: 211 MGHEASGVVAKIG---SKSRI*QLVIEWP*SPACRVGTASSVRQDDTTYAPT*SSAPRPQ 381
+GHE+SGV+ +G S + V P +P CR T S ++ + P
Sbjct: 55 LGHESSGVICAVGEGVSDLKEGDRVAIEPGTP-CR--TCSYCKKGRYNLCAKMNFCATPP 111
Query: 382 LHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKRA 513
HG+L R Y H ADFC+KLPDHV++EEGALLEPL+VG+HAC RA
Sbjct: 112 YHGSLCRRYNHQADFCYKLPDHVSLEEGALLEPLSVGVHACNRA 155
Score = 108 bits (259), Expect = 4e-24
Identities = 65/136 (47%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Frame = +3
Query: 255 VKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPVTRK--PRQILQARSRFL 428
V +L GDRVAIEPG PCR C +CK GRY+LC M FCATPP R QA +
Sbjct: 70 VSDLKEGDRVAIEPGTPCRTCSYCKKGRYNLCAKMNFCATPPYHGSLCRRYNHQADFCYK 129
Query: 429 LQAS*SRDHGRRSATGAPRGGHSRVQEGGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKV 608
L S + G + G H+ G++ G VLV GAGPIGL+T+LTAKA GA KV
Sbjct: 130 LPDHVSLEEGALLEPLSV-GVHA-CNRAGITIGSNVLVCGAGPIGLVTLLTAKACGASKV 187
Query: 609 LIIDILQSRLDFAKSL 656
I D+ + RL A+ L
Sbjct: 188 AITDLDEGRLKKAREL 203
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 46.8 bits (106), Expect = 2e-05
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Frame = +1
Query: 67 LRLVQTPIPEISD-DEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAK 243
L ++ P+P +S+ EV++++ GIC D+ + G + +++GHE SGVV+
Sbjct: 60 LSVITRPVPHVSNPSEVIVKVAYSGICDRDLQILE----GELPAAKCVVLGHEFSGVVSD 115
Query: 244 IGSKSRI*QLVIEWP*SPACRVGTASSVRQDDTTYAPT--*SSAPRPQLHGNLVRYYKHA 417
+GS + + +P T + R+ + SA +G +Y +
Sbjct: 116 VGSDVKNVSIGDRVVVNPNSSCNTCKACRRGQPHFCEKGGTGSAIGVWKNGGWTQYARVH 175
Query: 418 ADFCFKLPDHVTMEEGALLEPLAVGIH 498
A +P V++++ AL EP++ +H
Sbjct: 176 APNIHIVPPQVSLKQAALCEPISCVLH 202
Score = 42.7 bits (96), Expect = 3e-04
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 252 EVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 350
+VKN+++GDRV + P C C+ C+ G+ H C
Sbjct: 119 DVKNVSIGDRVVVNPNSSCNTCKACRRGQPHFC 151
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 252 EVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 350
+V++++VGDRV I P C C+FC G+ HLC
Sbjct: 71 DVQHVSVGDRVVINPLTSCGICDFCLKGQPHLC 103
Score = 33.9 bits (74), Expect = 0.12
Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = +1
Query: 61 NDLRLVQTPIPEI-SDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 237
N L ++ P P + S +V++++ + G+D+H + G + +I+GH+ G+V
Sbjct: 10 NHLSVITRPTPHVQSPRDVVVKIAYSAVSGTDLHVLE----GRIDCAKSIILGHQFVGIV 65
Query: 238 AKIGSKSR---I*QLVIEWP*SPACRVGTASSVRQDDTTYAPT*SSAPRPQLHGNLVRYY 408
+IG+ + + V+ P +C + Q ++A + +G ++
Sbjct: 66 KEIGADVQHVSVGDRVVINP-LTSCGICDFCLKGQPHLCKVEGKNTAIGIKRNGGWAQFC 124
Query: 409 KHAADFCFKLPDHVTMEEGALLEPLA 486
+ +A LP VT E+ EP++
Sbjct: 125 RLSAKNVIPLPHQVTFEQALFSEPMS 150
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 483 RGGHSRVQEGGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKS 653
R H G VLV+GAGPIGL T + GA V +++ R FA++
Sbjct: 540 RANHKDYDRGTTCEHLQVLVIGAGPIGLRTAIEMALLGAQVV----VVEKRTSFARN 592
>SB_27978| Best HMM Match : HycH (HMM E-Value=0.12)
Length = 316
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 7 FRASDMATDNLTALLYKPN---DLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQ 177
FR ++ +++ A+L+ P + + P P++ + EVL+R+ + +D +KG
Sbjct: 18 FRYYAISAESMKAVLFTPGGPESMYIGDAPRPKLKETEVLIRVHFTALNRADT-LQRKGS 76
Query: 178 CGHFVLEEPMIMGHEASGVVAKIGS 252
E I+G E SG+V ++GS
Sbjct: 77 YPP-PPGESEILGLEVSGIVEELGS 100
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 14 RPTWPQIT*P--------LCCTNQMICVWYKHRSLKYLMMRSCCAWTAWVSAGQMSTTGR 169
RP WP+ P + T I V K LK +MRS + W S+ + S +
Sbjct: 545 RPLWPESELPSDVTMAAIVVATANPIAVTVKPYFLKIALMRSLSGF--WFSSSRFSRSSS 602
Query: 170 RVNADTSCWKNQ*SWDTKLQE*WPRSV 250
++ S +++ SW W RSV
Sbjct: 603 SISDSLSSLRSRASWRLLSDISWTRSV 629
>SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 10 RASDMATDNLTALLYKPNDLRLVQTPIPE 96
R+ ++ TD+ T L P D+R+ QTP PE
Sbjct: 674 RSYEIETDDGTTLRRNPADIRMQQTPSPE 702
>SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 55 KPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGV 234
KP + ++ P+ EV +++ G+C +D Y G + P I+GHE G+
Sbjct: 14 KPLSIETIEVAPPKAH--EVRIKILATGVCHTDA-YTLSGVDPEGLF--PCILGHEGGGI 68
Query: 235 VAKIG 249
V +G
Sbjct: 69 VESVG 73
>SB_28920| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.24)
Length = 284
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 522 AGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIID 620
A + VLV+G+GP GL + L A GA +V++I+
Sbjct: 59 AKNKVLVIGSGPCGLRSALEAALLGA-QVMVIE 90
>SB_19910| Best HMM Match : C1_4 (HMM E-Value=3.2)
Length = 201
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +3
Query: 306 CRYCEFCKTG---RYHLCPDMIFCATPPVTRKPRQILQARSRFLLQAS*SRDHGRRSATG 476
C YC C+ G R H C ++ + + R + R R L + +H RRS
Sbjct: 83 CYYCTSCQKGYDRRNHKCNNLCYGCVLTLNRHESEDSTQRMRTRLHKAAGLEHRRRSLAE 142
Query: 477 APRG 488
RG
Sbjct: 143 YTRG 146
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 571 VRRPMGPAPSTSTTCPAETPPSCTRECP 488
V +P+ +T+ CP+E +C ECP
Sbjct: 1423 VLQPLNEKHNTTAECPSECSETCKPECP 1450
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = -2
Query: 577 SMVRRPMGPAPSTST-TCPAETPPSC----TRECPPRGAPV 470
S RP PAP + PA++ P TR+ PPRGAP+
Sbjct: 1840 SQPARPQPPAPPMHAGSIPAQSIPVAPSRGTRQYPPRGAPM 1880
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 553 PAPSTSTTCPAETPPSCTRECPPRGAPVAL 464
P P T+T PA T P T + PP A L
Sbjct: 113 PPPPTTTAPPATTSPPTTTDSPPTTAAETL 142
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 565 RPMGPAPSTSTTCPAETPPSCTRECPP 485
R P + TCPAE P +RE PP
Sbjct: 248 RETPPVQPRNPTCPAEKPHLSSRETPP 274
>SB_42197| Best HMM Match : rve (HMM E-Value=0.017)
Length = 602
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +1
Query: 376 PQLHGNLVRYYKHAADF--CFKL-PDHVTMEEGA---LLEPLAVGIHACKRAESRRDT 531
P G LV YK+ + FK+ P H+T+EEGA + P +V +H + + DT
Sbjct: 109 PLTKGKLVNSYKNRFEGLGAFKMRPYHITLEEGAEPVIHPPSSVPVHLRELYKQEIDT 166
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Frame = +3
Query: 198 RTNDHGTRSFRSSGQDRFEVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDM------ 359
+ + H R R+ D EV + V + + YC CK G LC D
Sbjct: 415 KKDKHSKRRHRTCDDD--EVMGVEVEMTSSSSEDIHSDYCRVCKDGGQLLCCDKCPMAYH 472
Query: 360 IFCATPPVTRKP 395
+ C PP+ R P
Sbjct: 473 LKCLIPPMMRVP 484
>SB_54044| Best HMM Match : PARP (HMM E-Value=0.078)
Length = 489
Score = 27.9 bits (59), Expect = 7.7
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 475 EPLAVGIHACKRAESRRDTWCWYWERD 555
+ LA +H K+ S++ W+WE +
Sbjct: 257 QELATNVHCLKKTNSKKTKVTWFWEHN 283
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 370 PRPQLHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPL-AVGIHACKRAE 516
P PQLH L+++ KH A LP V+ A L P A+ C RAE
Sbjct: 157 PNPQLHPGLLQFQKHEAGLAL-LPRGVSGYPVAPLFPSPAMPPRHCLRAE 205
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 562 PMGPAPSTSTTCPAETPPSCTRE 494
P G P+T +T P TPPS T +
Sbjct: 272 PRGHLPTTPSTTPQATPPSTTSQ 294
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,912,439
Number of Sequences: 59808
Number of extensions: 516566
Number of successful extensions: 1855
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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