Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00507
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 156 1e-38
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 142 1e-34
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 41 7e-04
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 41 7e-04
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 41 7e-04
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 41 9e-04
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 32 0.31
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 31 0.95
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 29 2.2
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 29 2.2
AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical... 29 2.2
Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical pr... 29 2.9
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 29 2.9
U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead transc... 29 2.9
M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific cy... 29 2.9
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 29 3.8
AF490975-1|AAQ06433.1| 703|Caenorhabditis elegans ABC7 protein ... 29 3.8
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical pr... 28 5.1
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 28 5.1
AF014940-4|AAB63936.2| 322|Caenorhabditis elegans Hypothetical ... 28 6.7
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 156 bits (378), Expect = 1e-38
Identities = 73/163 (44%), Positives = 105/163 (64%)
Frame = +1
Query: 22 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 201
M+ DNL+A+LY +DLRL Q PIP+ ++VL+++ VGICGSDVHYW G G FV++E
Sbjct: 1 MSQDNLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKE 60
Query: 202 PMIMGHEASGVVAKIGSKSRI*QLVIEWP*SPACRVGTASSVRQDDTTYAPT*SSAPRPQ 381
PMI+GHE SG+V+++G++ + ++ P + P P
Sbjct: 61 PMIVGHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPP 120
Query: 382 LHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 510
+HG L R+ H ADFCFKLPD+++ E+GAL+EPL+V IHAC+R
Sbjct: 121 VHGTLSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRR 163
Score = 121 bits (291), Expect = 5e-28
Identities = 63/135 (46%), Positives = 82/135 (60%)
Frame = +3
Query: 252 EVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPVTRKPRQILQARSRFLL 431
EVK+L VGDR+A+EPG+PC+ CE CKTGRY+LCP+M F ATPPV + + + F
Sbjct: 78 EVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPVHGTLSRFVVHDADFCF 137
Query: 432 QAS*SRDHGRRSATGAPRGGHSRVQEGGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVL 611
+ + + + G V GH VLVLGAGPIG+L ++TAKA GA KV+
Sbjct: 138 KLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPIGVLNLITAKAVGAGKVV 197
Query: 612 IIDILQSRLDFAKSL 656
I D+ RL AK L
Sbjct: 198 ITDLDDGRLALAKKL 212
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 142 bits (345), Expect = 1e-34
Identities = 72/163 (44%), Positives = 103/163 (63%)
Frame = +1
Query: 22 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 201
M+ DNL+A+LY NDLRL Q PI + +VL++++ VGICGSDVH+ G G FV++E
Sbjct: 1 MSQDNLSAVLYGINDLRLEQAPISKPGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKE 60
Query: 202 PMIMGHEASGVVAKIGSKSRI*QLVIEWP*SPACRVGTASSVRQDDTTYAPT*SSAPRPQ 381
PM++GHE+SGVV++IGS+ + ++ P + P P
Sbjct: 61 PMVLGHESSGVVSEIGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPP 120
Query: 382 LHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 510
++G L R+ H ADFCFKLPD+++ E+GALLEPL+V I AC+R
Sbjct: 121 VNGALSRFVVHDADFCFKLPDNLSFEDGALLEPLSVAIQACRR 163
Score = 115 bits (277), Expect = 3e-26
Identities = 60/135 (44%), Positives = 78/135 (57%)
Frame = +3
Query: 252 EVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPVTRKPRQILQARSRFLL 431
EVK VGDR+A+EPG+PC+ CE CK GRY+LCPDM F ATPPV + + + F
Sbjct: 78 EVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPPVNGALSRFVVHDADFCF 137
Query: 432 QAS*SRDHGRRSATGAPRGGHSRVQEGGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVL 611
+ + + + G V G +LVLGAGPIG+L +LTAKA GA KV+
Sbjct: 138 KLPDNLSFEDGALLEPLSVAIQACRRGTVQMGQKILVLGAGPIGVLNLLTAKAIGASKVV 197
Query: 612 IIDILQSRLDFAKSL 656
I D+ RL A+ L
Sbjct: 198 ITDLNDERLALARLL 212
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +1
Query: 67 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 246
L + Q PIP+ ++DE+L++M+ GIC SDVH W G H+V + PMI GHE +G V +
Sbjct: 22 LEIKQLPIPQPNEDELLVKMEYSGICHSDVHTW-LGDF-HYVSKCPMIGGHEGAGSVISV 79
Query: 247 GSK 255
GSK
Sbjct: 80 GSK 82
Score = 36.7 bits (81), Expect = 0.014
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Frame = +3
Query: 252 EVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLCPDMIFCATPPV-TRKPRQILQARSRF 425
+VKN +GD+V I+ C CE+C+TG LCP + T + ++
Sbjct: 82 KVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCPHVWNIGVQKYGTFQEYATIRDVDAI 141
Query: 426 LLQAS*SRDHGRRSATGAPRGGHSRVQEGGVSAGHVVLVLGA-GPIGLLTMLTAKAFGAH 602
+ S + G + ++E V +G +V V GA G +G + A+A G
Sbjct: 142 KIPKSMNMAAAAPVLCGGVT-AYKALKESEVKSGQIVAVTGAGGGLGSFAIQYARAMGM- 199
Query: 603 KVLIIDIL 626
+V+ DI+
Sbjct: 200 RVVAEDIV 207
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +1
Query: 67 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 246
L + Q P+P +DDE+L++++ GIC SD+H W V P++ GHE +G V +I
Sbjct: 21 LEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVC--PLVGGHEGAGSVVQI 78
Query: 247 G 249
G
Sbjct: 79 G 79
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +3
Query: 258 KNLT---VGDRVAIE-PGVPCRYCEFCKTGRYHLC 350
KN+T +GD+ ++ C CEFCK G LC
Sbjct: 80 KNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLC 114
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 LRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE--PMIMGHEASGVVA 240
L + Q +P+ ++E+L++++ GIC SD+H W+ G F P+I GHE +G V
Sbjct: 22 LEVRQVSVPQPQENELLVKIEYSGICHSDLHTWE----GDFEYASICPLIGGHEGAGTVV 77
Query: 241 KIGSK 255
IGSK
Sbjct: 78 TIGSK 82
Score = 36.7 bits (81), Expect = 0.014
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Frame = +3
Query: 252 EVKNLTVGDRVAIEP-GVPCRYCEFCKTGRYHLCPDMIFCATPPVTRKPRQILQARSRFL 428
+VK +GDR I+ C CE+CKTG LC D I ++ L R
Sbjct: 82 KVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLC-DHIQNYGIDRHGTFQEYLTIRDIDA 140
Query: 429 LQAS*SRDHGRRSATGAPRGG---HSRVQEGGVSAGHVVLVLGA-GPIGLLTMLTAKAFG 596
++ S D +A GG + ++ V G +V++ GA G +G + AKA G
Sbjct: 141 IKV--SNDTNLAAAAPVLCGGVTAYKSLKATNVKPGQIVVLTGAGGGLGSFGIQYAKAMG 198
Query: 597 AHKVLIIDILQSRLDFAKSL 656
+V+ +D + S+ D ++L
Sbjct: 199 M-RVVAVDHI-SKEDHCRNL 216
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 516 VSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAK 650
V G V V G G +GL ++ AKA GA K++ ID+++S+ + AK
Sbjct: 192 VEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAK 236
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 58 PNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 237
P + +Q P+ EV +++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAH--EVRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76
Query: 238 AKIG 249
+G
Sbjct: 77 ESVG 80
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 516 VSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAK 650
V G V V G G +GL ++ AKA GA K++ ID+++S+ + AK
Sbjct: 192 VEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAK 236
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 58 PNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 237
P + +Q P+ EV +++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAH--EVRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76
Query: 238 AKIG 249
+G
Sbjct: 77 ESVG 80
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 516 VSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAK 650
V G V V G G +GL ++ AKA GA K++ ID+++S+ + AK
Sbjct: 194 VEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAK 238
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 58 PNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 237
P + +Q P+ + V ++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHEVRVKFQILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 78
Query: 238 AKIG 249
+G
Sbjct: 79 ESVG 82
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 516 VSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAK 650
V G V V G G +GL ++ AKA GA K++ ID+++S+ + AK
Sbjct: 365 VEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFEKAK 409
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 562 PMGPAPSTSTTCPAETPPSCTRECPPRGAP 473
P GPA P++ +CTRECPP G P
Sbjct: 160 PQGPADGGYQEGPSDAVEACTRECPP-GPP 188
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 598 APKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRECPPRGAPVALLLP 455
+PKA V+ RR P ++ P + P R P G P A + P
Sbjct: 258 SPKAPVVAPTRRAPSPKAPVASVAPVKPKPFVARPAPSFGKPRAAVAP 305
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 595 PKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRE 494
P + S+ P P PS+S++ PA+ P + T E
Sbjct: 592 PAVTSASLPLLPSSPEPSSSSSSPAQQPSASTEE 625
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -2
Query: 598 APKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRECPPRGAPVALLLP 455
+PKA V+ RR P + P + P R P G P A + P
Sbjct: 254 SPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPNFGKPRAAVAP 301
>AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical
protein Y54G2A.45 protein.
Length = 354
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 315 CEFCKTGRYHLCPDMIFCATPPVTRKPRQIL 407
CE C YH C D C TP +++L
Sbjct: 21 CETCLGSGYHYCADSKLCNTPACVNTIKEVL 51
>Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical
protein C52E4.1 protein.
Length = 329
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 565 RPMGPAPSTSTTCPAETPPSCTREC 491
+P AP TS CP PSC+ C
Sbjct: 184 KPYPIAPCTSGNCPESKTPSCSMSC 208
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +3
Query: 489 GHSRVQEGGVSA----GHVVLVLGAGPIGLLTMLTAKAFGAH 602
G +V+E V + G V+ +LG G +G L A+AFG H
Sbjct: 309 GADQVRENAVGSKKVRGSVLGILGCGRVGTAVGLRARAFGLH 350
>U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform a protein.
Length = 300
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 607 TLCAPKALAVSMVRRPMGPAPSTSTTCPAETPPSCTRECPPRGAPVA 467
T+C + + + ++R P+ PS S T ETP + + + P P+A
Sbjct: 12 TICEKQNITMDLLRSPI-QIPSASDTIKIETPSTISSQPSPIQTPLA 57
>M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific
cysteine protease-1 protein.
Length = 329
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 565 RPMGPAPSTSTTCPAETPPSCTREC 491
+P AP TS CP PSC+ C
Sbjct: 184 KPYPIAPCTSGNCPESKTPSCSMSC 208
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 571 VRRPMGPAPSTSTTCPAETPPSCTRECPPRGAPVALLLP 455
VR P P+ ++ T P +TPP P +PVA P
Sbjct: 73 VRLPRTPSRNSPLTPPTKTPPHTPTRTPTTESPVAPRTP 111
>AF490975-1|AAQ06433.1| 703|Caenorhabditis elegans ABC7 protein
protein.
Length = 703
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 22 MATDNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGS 150
+A D L A L+K ++ V + DD+++L +D CGS
Sbjct: 656 LAVDGLYAQLWKSQNIHGVAPKKSKEEDDDLMLELDLDKCCGS 698
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -2
Query: 562 PMGPAPSTSTTCPAETPPSCTRECP--PRGAP 473
P P + C A+TPP C + CP P G P
Sbjct: 132 PGAPGKGAAVPCEAKTPPPC-KPCPAGPPGPP 162
>Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical
protein ZK632.2 protein.
Length = 710
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 556 GPAPSTSTTCPAETPPSCTR 497
GP PSTS T PA P+ T+
Sbjct: 543 GPGPSTSATLPATVAPTSTK 562
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 474 GAPRGGHSRVQEGGVSAG-HVVLVLGAGPIGLLTM 575
GAPRG + GGV +G + +G P G TM
Sbjct: 115 GAPRGASTMTAVGGVPSGASTMTAVGGAPTGASTM 149
>AF014940-4|AAB63936.2| 322|Caenorhabditis elegans Hypothetical
protein W02D7.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 375 AWRRRSCRGIGGIVLSYR 322
AW++RS R IGG ++ YR
Sbjct: 181 AWKKRSSRDIGGRIVMYR 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,193,735
Number of Sequences: 27780
Number of extensions: 353865
Number of successful extensions: 1461
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -