Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00507
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    25   0.64 
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    25   0.64 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.64 
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    24   1.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.5  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   5.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.8  

>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 29  QIT*PLCCTNQMICVWYKHRSLKY 100
           +I   LC T + I +W+++R +K+
Sbjct: 40  EIAHALCLTERQIKIWFQNRRMKW 63


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 29  QIT*PLCCTNQMICVWYKHRSLKY 100
           +I   LC T + I +W+++R +K+
Sbjct: 40  EIAHALCLTERQIKIWFQNRRMKW 63


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 29  QIT*PLCCTNQMICVWYKHRSLKY 100
           +I   LC T + I +W+++R +K+
Sbjct: 302 EIAHALCLTERQIKIWFQNRRMKW 325


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 29  QIT*PLCCTNQMICVWYKHRSLK 97
           +I   LC T + I +W+++R +K
Sbjct: 40  EIAHALCLTERQIKIWFQNRRMK 62


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 598 APKALAVSMVRRPMGPAPSTSTTCPAETPPS 506
           AP  L  S + + + P P+ S  C A   P+
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCSAAGNPT 450


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 598 APKALAVSMVRRPMGPAPSTSTTCPAETPPS 506
           AP  L  S + + + P P+ S  C A   P+
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCSAAGNPT 450


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 571 VRRPMGPAPSTSTTCPAE 518
           V+ P+G   ST +TC  E
Sbjct: 486 VKSPLGSVSSTESTCSGE 503


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -2

Query: 553 PAPSTSTTCPAE-TPPSCTRECPPRGAPVA 467
           P+P  S   P   +PP+ ++  PP G P A
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQGPPPGGPPGA 54


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 547 ERDPSVSLPCSQLKPLE 597
           ER+ SVSL C + KP E
Sbjct: 83  EREASVSLFCPRAKPGE 99


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 602 VCSKGFSCEH 573
           +CS G+ CEH
Sbjct: 373 ICSNGWICEH 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,380
Number of Sequences: 438
Number of extensions: 4108
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)