Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00505
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   3.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.7  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +1

Query: 664 FFWMNVICINV 696
           ++W+NV C+N+
Sbjct: 55  YYWLNVCCLNL 65


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 654 DSNILLDERDLYKRMSFSAQRFSLGKIG*KAISVVQCYAWG 776
           D  + LD+RDL+ R         + K G +   VV+  A G
Sbjct: 27  DLIVTLDDRDLWLRFECLTNEMIVTKNGRRMFPVVKVTAAG 67


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 421 LKRWFEAYKRNGDN 380
           LK W+E  +RNG N
Sbjct: 57  LKLWWEFCQRNGHN 70


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 575 DKNPSAILMLIDM 537
           D  PSA+L+LID+
Sbjct: 739 DFQPSAVLLLIDL 751


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 575 DKNPSAILMLIDM 537
           D  PSA+L+LID+
Sbjct: 739 DFQPSAVLLLIDL 751


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 575 DKNPSAILMLIDM 537
           D  PSA+L+LID+
Sbjct: 739 DFQPSAVLLLIDL 751


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 575 DKNPSAILMLIDM 537
           D  PSA+L+LID+
Sbjct: 739 DFQPSAVLLLIDL 751


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/15 (46%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = -1

Query: 535 NIGLGGLLNW-KICV 494
           N+GL GL++W  +C+
Sbjct: 10  NLGLNGLIDWYTVCL 24


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 114 TLFVLLCCGIVVFGKQCCPDGII 182
           TL + L  G + FG+    DG++
Sbjct: 422 TLIISLVIGAIYFGQDLNQDGVM 444


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 114 TLFVLLCCGIVVFGKQCCPDGII 182
           TL + L  G + FG+    DG++
Sbjct: 422 TLIISLVIGAIYFGQDLNQDGVM 444


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,953
Number of Sequences: 336
Number of extensions: 4956
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)