Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00505
         (802 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0351 + 16666398-16666532,16666911-16667048,16667398-166683...    29   3.3  
02_05_0470 + 29303558-29303681,29303797-29303847,29304811-29305019     29   4.3  
11_08_0063 - 28125067-28125969                                         29   5.7  
08_02_0580 - 18953208-18953513,18953668-18953868,18953929-189540...    28   7.5  

>11_04_0351 +
           16666398-16666532,16666911-16667048,16667398-16668306,
           16668383-16668511,16668774-16668996,16669085-16669231,
           16669332-16669573,16669660-16669689,16669784-16669865,
           16669968-16670128,16670775-16670898,16671206-16671414
          Length = 842

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -1

Query: 364 CTVFVHRTETILIRIFGENKIWSVLSGHLISIQDYIFNSNLPLLQFMLTIGS 209
           C V V  T  +L+++F    I ++ SGH + +   I  S   +L   L +GS
Sbjct: 254 CLVLVGITSEVLVKLFFHQSIGTLHSGHFMPLIGLIPMSMPAVLYLALALGS 305


>02_05_0470 + 29303558-29303681,29303797-29303847,29304811-29305019
          Length = 127

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +1

Query: 604 FRQDLCTLTGFVVYTWMIATFFWMNVICINVCRSVLNASRLAKSDRKQFLWYS 762
           F +++C+    + +    +TFFW+N +  N   ++  A    K D    +W S
Sbjct: 75  FHKEVCSYDRIIEWLLARSTFFWINHLLFNYNYTLNYAHMKLKYDNTVHVWVS 127


>11_08_0063 - 28125067-28125969
          Length = 300

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -1

Query: 394 RNGDNSRTR-VCTVFVHRTETI-LIRIFGENKIWSVLSGHLIS 272
           RN D    R  C   ++ T  I  + +FG  + W+ LSGH ++
Sbjct: 43  RNKDEGSLREACDTGIYNTVIISFLTVFGHGRYWADLSGHPVA 85


>08_02_0580 -
           18953208-18953513,18953668-18953868,18953929-18954009,
           18954096-18954410,18954493-18954636,18954733-18954822,
           18954907-18954983,18955122-18955182,18955264-18955490,
           18955581-18955740,18955825-18956025,18956114-18956209,
           18956380-18956565,18956641-18956810,18957044-18957275,
           18958652-18959029
          Length = 974

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 619 CTLTGFVVYTWMIATFFWMNVICINVCRSVLNASRLAKS 735
           C +T   +Y W+I+TFF   V+ I     + N + + KS
Sbjct: 417 CVITIDDIYKWLISTFFLWFVLAIYFDNIIPNVNGVRKS 455


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,467,977
Number of Sequences: 37544
Number of extensions: 487682
Number of successful extensions: 1205
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)