Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00505
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37092-8|CAA85460.2| 327|Caenorhabditis elegans Hypothetical pr... 34 0.10
AY037792-1|AAK94756.1| 327|Caenorhabditis elegans SRA-12 protein. 34 0.10
Z78410-10|CAB01640.2| 337|Caenorhabditis elegans Hypothetical p... 31 0.73
Z78410-2|CAB01636.2| 327|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical pr... 29 5.1
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 29 5.1
U12964-8|AAK93848.1| 231|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF078787-6|AAC26953.1| 290|Caenorhabditis elegans Hypothetical ... 29 5.1
Z68751-2|CAA92972.2| 193|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23527-1|AAC46575.2| 1147|Caenorhabditis elegans Neuronal igcam ... 28 8.9
>Z37092-8|CAA85460.2| 327|Caenorhabditis elegans Hypothetical
protein F44F4.7 protein.
Length = 327
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 508 NLRDLQGLCYMSMSISMALGFLSLGVLQLNTGFRQDLCTLTGFVVYTWMIA 660
NL+ Q +CY+S++ +A+ S GVL + R+++ TL F V W+ A
Sbjct: 228 NLKTTQAICYLSIAQFLAMFMYSGGVLLMRKN-RENIPTLIYFNVIVWVYA 277
>AY037792-1|AAK94756.1| 327|Caenorhabditis elegans SRA-12 protein.
Length = 327
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 508 NLRDLQGLCYMSMSISMALGFLSLGVLQLNTGFRQDLCTLTGFVVYTWMIA 660
NL+ Q +CY+S++ +A+ S GVL + R+++ TL F V W+ A
Sbjct: 228 NLKTTQAICYLSIAQFLAMFMYSGGVLLMRKN-RENIPTLIYFNVIVWVYA 277
>Z78410-10|CAB01640.2| 337|Caenorhabditis elegans Hypothetical
protein C51E3.3 protein.
Length = 337
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 490 CVHIFSNLRDLQGLCYMSMSISMALGFLSLGVLQLNTG 603
CVH+F NL Q C+ +++ + +G S G L L+ G
Sbjct: 66 CVHLFGNLTSTQAQCFYMLTVPL-IGLTSGGPLILSMG 102
>Z78410-2|CAB01636.2| 327|Caenorhabditis elegans Hypothetical
protein C51E3.2 protein.
Length = 327
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 490 CVHIFSNLRDLQGLCYMSMSISMALGFLSLGVLQLNTG 603
CVH+F NL Q C+ ++I + +GF + G L L+ G
Sbjct: 66 CVHLFGNLTSSQAQCFYILTIPI-VGFTTGGPLILSMG 102
>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
protein ZK675.1 protein.
Length = 1405
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 80 LAFKQKKHEGNYFIRVIV-LWNRCIREAMLSRWHNNFTTG*MRHRAN 217
L FKQK + + + WN E +L W NFT H+AN
Sbjct: 575 LRFKQKPGRNSMKTGLDMDAWNETAAEQVLQAWQRNFTKSLYNHKAN 621
>Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical
protein F58B4.1b protein.
Length = 611
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 622 TLTGFVVYTWMIATFFWMNVICINVCRSVLNASRL 726
T T +V + A FW NV CIN+ +S +R+
Sbjct: 182 TATPKIVKAFEQAVAFWQNVTCINIMQSSTAINRI 216
>Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical
protein F58B4.1a protein.
Length = 578
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 622 TLTGFVVYTWMIATFFWMNVICINVCRSVLNASRL 726
T T +V + A FW NV CIN+ +S +R+
Sbjct: 182 TATPKIVKAFEQAVAFWQNVTCINIMQSSTAINRI 216
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
ZK328.7a protein.
Length = 1332
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 597 YRVPSRFMYIDRIRRVHLDDSNILLDERDLYKRMSFSAQRFSLGKIG 737
++ RF+ R+H D + + D + RM+F+A R + +G
Sbjct: 1128 FQSTDRFLLAQNFIRMHTTDKSAIQAALDEFNRMAFNADRSQVTNVG 1174
>U12964-8|AAK93848.1| 231|Caenorhabditis elegans Hypothetical
protein F26F4.12 protein.
Length = 231
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 215 NGQHELQQWKIAIEDIILNGNKVSTQDTPDFVFAEDPDEYCLGAMYKNGTDSSSGIISIA 394
N + +++W A ED L KV ++TP+ + + D D Y A+++ ++ S I+
Sbjct: 62 NMEDPIEKWLTAAEDGELELVKVLLEETPNLLNSRDADGYT--ALHRASYNNHSPIVDHL 119
Query: 395 LV 400
L+
Sbjct: 120 LL 121
>AF078787-6|AAC26953.1| 290|Caenorhabditis elegans Hypothetical
protein T17A3.7 protein.
Length = 290
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -2
Query: 495 YTAKVAKRNTTEINVSIPLVSMSLALS 415
+T+K AKR+ E+N+++ ++M L+ S
Sbjct: 32 FTSKAAKRHVEELNINVSYINMFLSTS 58
>Z68751-2|CAA92972.2| 193|Caenorhabditis elegans Hypothetical
protein T05E11.2 protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 475 FSDFRCVHIFSNLRDLQGLCYMSMSISMALGFLSLGVLQLNTGF-RQDLCTLTGFVVYTW 651
F DF I L G C +++ ++ F S G L + +C+L+GF+ YT+
Sbjct: 69 FGDFELASIILISASL-GCCILAICFAICTIFTSFGALAHSVVLIAAAMCSLSGFLTYTY 127
>U23527-1|AAC46575.2| 1147|Caenorhabditis elegans Neuronal igcam
protein 1, isoform a protein.
Length = 1147
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 350 YKNGTDSSSGIISIALV---CFEPSLKANDIETSGILTLISVVFLLATFAVY 496
+K SG++S V EP L +I GI+T ++++ L F V+
Sbjct: 838 FKVSNSKKSGMLSSVRVFIGSLEPHLTFKNIALGGIITFLALIILFVCFFVF 889
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,886,973
Number of Sequences: 27780
Number of extensions: 455389
Number of successful extensions: 1295
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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