Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00504
(718 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram nega... 79 1e-16
AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram nega... 79 1e-16
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 26 1.0
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 26 1.0
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 24 4.1
AJ302658-1|CAC35523.1| 145|Anopheles gambiae gSG7 protein protein. 24 5.4
AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled ... 23 7.2
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 23 7.2
>AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 79.4 bits (187), Expect = 1e-16
Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 11/85 (12%)
Frame = +3
Query: 252 PWLKGTIMAPLDQIFYISLGLRVGGVHDFTD---NPD-KPWKNRNSKAMLAFWNDRTNWL 419
PW GT MAP DQ F+ + L VGGV F D NP KPWKN + +A FWN R WL
Sbjct: 311 PWRHGTRMAPFDQEFHFIINLAVGGVAFFPDAATNPGGKPWKNNSPQAATDFWNGRAQWL 370
Query: 420 PTW-------YDAAMRVDYVRVYAL 473
PTW A++ VDYV+V+AL
Sbjct: 371 PTWNLERDGGKSASLLVDYVKVWAL 395
Score = 33.1 bits (72), Expect = 0.009
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 7 GNAVFSKKLYAGPVLSDTEPFRSKLMKEKLGIENWNKEYHNYTMIWKPNGIEVLVDGEQF 186
G + L+ GP S + L K L + ++K + + +W P+ I V ++GE
Sbjct: 231 GTRQVGQTLHFGPNPSYNGYPTATLTKNALPEQEFSKSFSTFGFVWTPDNITVSINGEDL 290
Query: 187 GVVDPGEGFYTVG 225
+ G F+T G
Sbjct: 291 ATI--GGDFWTRG 301
>AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 79.4 bits (187), Expect = 1e-16
Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 11/85 (12%)
Frame = +3
Query: 252 PWLKGTIMAPLDQIFYISLGLRVGGVHDFTD---NPD-KPWKNRNSKAMLAFWNDRTNWL 419
PW GT MAP DQ F+ + L VGGV F D NP KPWKN + +A FWN R WL
Sbjct: 311 PWRHGTRMAPFDQEFHFIINLAVGGVAFFPDAATNPGGKPWKNNSPQAATDFWNGRAQWL 370
Query: 420 PTW-------YDAAMRVDYVRVYAL 473
PTW A++ VDYV+V+AL
Sbjct: 371 PTWNLERDGGKSASLLVDYVKVWAL 395
Score = 33.1 bits (72), Expect = 0.009
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 7 GNAVFSKKLYAGPVLSDTEPFRSKLMKEKLGIENWNKEYHNYTMIWKPNGIEVLVDGEQF 186
G + L+ GP S + L K L + ++K + + +W P+ I V ++GE
Sbjct: 231 GTRQVGQTLHFGPNPSYNGYPTATLTKNALPEQEFSKSFSTFGFVWTPDNITVSINGEDL 290
Query: 187 GVVDPGEGFYTVG 225
+ G F+T G
Sbjct: 291 ATI--GGDFWTRG 301
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 26.2 bits (55), Expect = 1.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 191 TPNCSPSTKTSMPLGFQIIV*L*YSLFQFSMPSFSF 84
+P+C + + + F + L + LF FS P FSF
Sbjct: 40 SPSCLECSSVPLFINFIFMFLLHFVLFSFSFPFFSF 75
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 26.2 bits (55), Expect = 1.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 94 LGIENWNKEYHNYTMIWKPNGIEVLVDGEQFGVVDPG 204
LG WN Y + + P G E++ + ++DPG
Sbjct: 652 LGPTLWNVMYDSVLDVQLPEGAEIIAFADDLLLLDPG 688
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 24.2 bits (50), Expect = 4.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 3 ERKRCLQQETVRWTRSIRHRAVQVEANERETW 98
+++R QQ+ ++ R R ++V +E ETW
Sbjct: 324 QQERMQQQQQLQRKRKPRPDIIEVSPSEGETW 355
>AJ302658-1|CAC35523.1| 145|Anopheles gambiae gSG7 protein protein.
Length = 145
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 539 HDHSTFHCLSFESQPP*YVDSLKCI 465
HDH + E+ P Y+D LK +
Sbjct: 109 HDHDQYSMECLEAAEPKYLDGLKTL 133
>AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled
receptor 3 protein.
Length = 605
Score = 23.4 bits (48), Expect = 7.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 255 WLKGTIMAPLDQ 290
W KGTI+ P+D+
Sbjct: 415 WAKGTILGPIDR 426
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 23.4 bits (48), Expect = 7.2
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = -3
Query: 581 EPELFLLIVSRHLLHDHSTFHCLSFESQPP*YVDSLKCINSDVINP 444
E ++ ++ V HL+ + +T H + Y+D + ++ I+P
Sbjct: 359 ENDIIVVDVENHLMGESTTIHWHGLHQRRTPYMDGVPHVSQCPISP 404
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,318
Number of Sequences: 2352
Number of extensions: 14431
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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