Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00504
(718 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g03240.1 68415.m00277 EXS family protein / ERD1/XPR1/SYG1 fam... 31 1.0
At3g48580.1 68416.m05304 xyloglucan:xyloglucosyl transferase, pu... 30 1.8
At5g57540.1 68418.m07189 xyloglucan:xyloglucosyl transferase, pu... 29 2.3
At5g57530.1 68418.m07188 xyloglucan:xyloglucosyl transferase, pu... 29 2.3
At4g14130.1 68417.m02180 xyloglucan:xyloglucosyl transferase, pu... 29 4.1
At3g23730.1 68416.m02984 xyloglucan:xyloglucosyl transferase, pu... 29 4.1
At2g18800.1 68415.m02188 xyloglucan:xyloglucosyl transferase, pu... 29 4.1
At2g03250.1 68415.m00278 EXS family protein / ERD1/XPR1/SYG1 fam... 29 4.1
At2g44760.1 68415.m05571 expressed protein 28 5.4
At2g05120.1 68415.m00539 expressed protein 28 5.4
At1g76090.1 68414.m08836 S-adenosyl-methionine-sterol-C-methyltr... 28 5.4
At2g36870.1 68415.m04520 xyloglucan:xyloglucosyl transferase, pu... 28 7.1
At4g28850.1 68417.m04123 xyloglucan:xyloglucosyl transferase, pu... 27 9.4
At4g25820.1 68417.m03714 xyloglucan:xyloglucosyl transferase / x... 27 9.4
At3g44990.1 68416.m04847 xyloglucan:xyloglucosyl transferase, pu... 27 9.4
At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1) domain... 27 9.4
>At2g03240.1 68415.m00277 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 823
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 210 LLYCWPAECSTSCGPWLKGTIMAPLDQIFYISLGLRV 320
L+Y W TS PWL+ ++ P ++++I++ L +
Sbjct: 713 LVYDWGLLNRTSKNPWLRDKLLVPQKKVYFIAMILNI 749
>At3g48580.1 68416.m05304 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
endoxyloglucan transferase EXGT-A4 GI:5139002 from
[Arabidopsis thaliana]
Length = 277
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 115 KEYHNYTMIWKPNGIEVLVDGEQFGVVDPGEGFY 216
K+YH+Y+ +W PN + VD V Y
Sbjct: 146 KDYHSYSFLWNPNQLVFYVDDTPIRVYSKNPDVY 179
>At5g57540.1 68418.m07189 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase (XTR9) GI:4218963 from
[Arabidopsis thaliana]
Length = 284
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 118 EYHNYTMIWKPNGIEVLVDG 177
++H YT++W P I LVDG
Sbjct: 141 DFHTYTVLWNPLNIIFLVDG 160
>At5g57530.1 68418.m07188 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase XTR9 GI:4218963 from
[Arabidopsis thaliana]
Length = 285
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 118 EYHNYTMIWKPNGIEVLVDG 177
++H YT++W P I LVDG
Sbjct: 142 DFHTYTVLWNPLNIIFLVDG 161
>At4g14130.1 68417.m02180 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative (XTR7) almost
identical to xyloglucan endotransglycosylase-related
protein XTR7 GI:1244760 from [Arabidopsis thaliana], one
amino acid difference
Length = 289
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 115 KEYHNYTMIWKPNGIEVLVDGEQFGVVDPGE 207
K +H Y+++W+P I LVD V + E
Sbjct: 142 KNFHTYSIVWRPQHIIFLVDNLPIRVFNNAE 172
>At3g23730.1 68416.m02984 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase-related protein
GI:1244760 from [Arabidopsis thaliana]
Length = 291
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 115 KEYHNYTMIWKPNGIEVLVDGEQFGVVDPGE 207
K +H Y+++W+P I +VD V + E
Sbjct: 141 KNFHTYSLVWRPQHIIFMVDNVPIRVFNNAE 171
>At2g18800.1 68415.m02188 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 305
Score = 28.7 bits (61), Expect = 4.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1
Query: 121 YHNYTMIWKPNGIEVLVDGE 180
+HNY+++W P+ I +DG+
Sbjct: 144 FHNYSILWNPSHIVFYIDGK 163
>At2g03250.1 68415.m00278 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 756
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 210 LLYCWPAECSTSCGPWLKGTIMAPLDQIFYISLGLRV 320
L+Y W TS PWL+ ++ P +++ +++ L V
Sbjct: 650 LVYDWGLLNRTSKNPWLRDNLLIPHKEVYVLAMILNV 686
>At2g44760.1 68415.m05571 expressed protein
Length = 504
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 118 EYHNYTMIWKPNGIEVLVDGEQFGVVDPGEGFYTVGRQNAVPHAAHG 258
+ + +++W P G+ VD ++ GV+ G G+Y+ N V +G
Sbjct: 435 DMQDVSVMWLPGGVSAYVDVKKDGVLCIGVGWYSDEGINLVMERDYG 481
>At2g05120.1 68415.m00539 expressed protein
Length = 1234
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 157 CH*ASKSLYNYDIPYSSSRCQVSLSLAST 71
CH +S LY +D+PY + + + L+ST
Sbjct: 463 CHGSSTRLYKFDLPYDAGKVLDASVLSST 491
>At1g76090.1 68414.m08836
S-adenosyl-methionine-sterol-C-methyltransferase
identical to
S-adenosyl-methionine-sterol-C-methyltransferase
GI:2246456 from [Arabidopsis thaliana]
Length = 359
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 306 LGLRVGGVHDFTDNPDKPWKNRNSKAMLAFWND 404
+G V D P KPW NR +A+W +
Sbjct: 271 VGFEVVKEKDLAKPPSKPWWNRLKMGRIAYWRN 303
>At2g36870.1 68415.m04520 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
cellulase (xyloglucan endo-transglycosylase) GI:311835
from [Tropaeolum majus]
Length = 299
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 115 KEYHNYTMIWKPNGIEVLVD 174
K++H+Y ++W P I LVD
Sbjct: 163 KDFHHYAILWSPREIIFLVD 182
>At4g28850.1 68417.m04123 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative contains
similarity to xyloglucan endotransglycosylase XET2
GI:8886867 from [Asparagus officinalis]
Length = 292
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 121 YHNYTMIWKPNGIEVLVDG 177
+HNYT+ W P+ + VDG
Sbjct: 143 FHNYTIHWNPSEVVWFVDG 161
>At4g25820.1 68417.m03714 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (XTR9) identical to xyloglucan
endotransglycosylase GI:4218963 from [Arabidopsis
thaliana]
Length = 287
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 118 EYHNYTMIWKPNGIEVLVDG 177
++H YT+ W P I LVDG
Sbjct: 145 DFHTYTVHWNPVNIIFLVDG 164
>At3g44990.1 68416.m04847 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative
Length = 293
Score = 27.5 bits (58), Expect = 9.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 115 KEYHNYTMIWKPNGIEVLVD 174
+++H+Y ++W PN I VD
Sbjct: 159 QDFHHYAILWNPNQIVFFVD 178
>At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile PF00564:
PB1 domain
Length = 174
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 375 CSYSSRAYPDYP*NRERHQRGD 310
CSY R P YP + R+Q GD
Sbjct: 12 CSYGGRITPRYPDGKLRYQGGD 33
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,476,844
Number of Sequences: 28952
Number of extensions: 294731
Number of successful extensions: 826
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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