Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00501
(485 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 144 9e-34
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 139 4e-32
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 119 3e-26
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 116 2e-25
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 116 3e-25
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 112 3e-24
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 104 9e-22
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 97 1e-19
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 97 2e-19
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 86 3e-16
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 74 1e-12
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 70 2e-11
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 65 7e-10
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 61 1e-08
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 57 2e-07
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 56 6e-07
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 56 6e-07
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 54 2e-06
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 52 7e-06
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 51 1e-05
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 49 5e-05
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 46 5e-04
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 43 0.003
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 42 0.006
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 41 0.017
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 40 0.023
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 39 0.069
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 39 0.069
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 37 0.21
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 37 0.28
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 37 0.28
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 34 2.0
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 34 2.0
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 33 2.6
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 33 2.6
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 33 2.6
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 33 2.6
UniRef50_Q287X1 Cluster: Large protein; n=1; Beilong virus|Rep: ... 33 4.5
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 33 4.5
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 33 4.5
UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 32 6.0
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 32 6.0
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 7.9
UniRef50_Q7VK73 Cluster: UvrABC system protein C; n=1; Helicobac... 32 7.9
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 144 bits (349), Expect = 9e-34
Identities = 71/85 (83%), Positives = 75/85 (88%)
Frame = +1
Query: 1 QTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 180
+TEKAFQKQ VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPFTGNVSIR
Sbjct: 47 ETEKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 105
Query: 181 GRILTGVVQKMKMQRTIVIRRDYLH 255
GRILTGVVQKMKMQRTIVIRRDYLH
Sbjct: 106 GRILTGVVQKMKMQRTIVIRRDYLH 130
Score = 107 bits (256), Expect = 2e-22
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
Y+ KYNRFEKRH+NMSVHLSPCFRDVEIGD+VT+GECRPLSKTVRFNVLKV
Sbjct: 131 YVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVGECRPLSKTVRFNVLKV 181
Score = 56.4 bits (130), Expect = 3e-07
Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 4/44 (9%)
Frame = +1
Query: 1 QTEKAFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 120
QTE++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 4 QTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 139 bits (336), Expect = 4e-32
Identities = 67/90 (74%), Positives = 77/90 (85%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 165
QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 166 NVSIRGRILTGVVQKMKMQRTIVIRRDYLH 255
NVSIRGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 106 bits (255), Expect = 2e-22
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
Y+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 119 bits (287), Expect = 3e-26
Identities = 57/88 (64%), Positives = 66/88 (75%)
Frame = +1
Query: 1 QTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 180
Q+E+AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPFTG VSIR
Sbjct: 8 QSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIR 67
Query: 181 GRILTGVVQKMKMQRTIVIRRDYLHTYP 264
G+ILTG V KM RTIVIRR YLH P
Sbjct: 68 GKILTGTVVSTKMHRTIVIRRAYLHYIP 95
Score = 90.2 bits (214), Expect = 2e-17
Identities = 37/51 (72%), Positives = 48/51 (94%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
Y+PKYNR+EKRH+N+ VH+SP FR V++GDIVT+G+CRP+SKTVRFNV+KV
Sbjct: 93 YIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVGQCRPISKTVRFNVVKV 142
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 116 bits (280), Expect = 2e-25
Identities = 57/88 (64%), Positives = 65/88 (73%)
Frame = +1
Query: 1 QTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 180
Q+E+AFQKQ +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF G VSIR
Sbjct: 8 QSERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIR 64
Query: 181 GRILTGVVQKMKMQRTIVIRRDYLHTYP 264
GRILTG V KM RTI+IRR+YLH P
Sbjct: 65 GRILTGTVVSTKMHRTIIIRREYLHFIP 92
Score = 85.0 bits (201), Expect = 8e-16
Identities = 34/51 (66%), Positives = 46/51 (90%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
++PKYNR+EKRH+N++ H+SP FR + GD+VT+G+CRPLSKTVRFNVL+V
Sbjct: 90 FIPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVGQCRPLSKTVRFNVLRV 139
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 116 bits (279), Expect = 3e-25
Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 QTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 165
QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG
Sbjct: 4 QTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 63
Query: 166 NVSIRGRILTGVVQKMKMQRTIVIRRDYLH 255
VSIRGRI+ G KM RTI++RR+YLH
Sbjct: 64 TVSIRGRIIAGTCHSAKMNRTIIVRRNYLH 93
Score = 71.7 bits (168), Expect = 8e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 273 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 124 RYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 112 bits (270), Expect = 3e-24
Identities = 53/88 (60%), Positives = 66/88 (75%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 QTEKAFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 171
+ ++AFQKQ +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFTGNV
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNV 93
Query: 172 SIRGRILTGVVQKMKMQRTIVIRRDYLH 255
S+RG IL G+V KM RTI+IRRDYLH
Sbjct: 94 SVRGAILKGIVISTKMTRTIIIRRDYLH 121
Score = 85.0 bits (201), Expect = 8e-16
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
Y+ KYNR+EKRHRN+ VH+SP F V+ GDIV G+CRPLSKTVRFNVLKV
Sbjct: 122 YVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVVCGQCRPLSKTVRFNVLKV 172
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 104 bits (250), Expect = 9e-22
Identities = 50/90 (55%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 QTEKAFQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 168
QT +QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 169 VSIRGRILTGVVQKM-KMQRTIVIRRDYLH 255
VSIRGRIL GVV KM+RT+V+RR+YLH
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLH 95
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
Y+ KY R+EKRH N SVH SP DV+ GD VT+GECRPLSKTVRFNVLKV
Sbjct: 96 YIQKYKRYEKRHTNFSVHCSPAL-DVKEGDTVTVGECRPLSKTVRFNVLKV 145
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 97.5 bits (232), Expect = 1e-19
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +1
Query: 43 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 222
N +G K R KN+GLGFKTPREAI+G Y+DKKCPFTG VSIRGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 223 RTIVIRRDYLH 255
TI++ RDYLH
Sbjct: 91 STIIVARDYLH 101
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 96.7 bits (230), Expect = 2e-19
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +1
Query: 43 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 222
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 223 RTIVIRRDYLH 255
RTI+IRR+YLH
Sbjct: 65 RTIIIRRNYLH 75
Score = 69.7 bits (163), Expect = 3e-11
Identities = 29/51 (56%), Positives = 42/51 (82%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
++ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+NVL+V
Sbjct: 76 FIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYNVLEV 125
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 86.2 bits (204), Expect = 3e-16
Identities = 37/66 (56%), Positives = 46/66 (69%)
Frame = +1
Query: 58 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 237
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 238 RRDYLH 255
RRDYLH
Sbjct: 76 RRDYLH 81
Score = 81.8 bits (193), Expect = 7e-15
Identities = 34/51 (66%), Positives = 44/51 (86%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFNVL++
Sbjct: 82 WISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVLRI 131
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 74.1 bits (174), Expect = 1e-12
Identities = 35/82 (42%), Positives = 48/82 (58%)
Frame = +1
Query: 10 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 189
K F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 190 LTGVVQKMKMQRTIVIRRDYLH 255
GVV+KMK ++TIV+ +Y+H
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVH 89
Score = 58.4 bits (135), Expect = 8e-08
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGECRPLSKT 383
Y KY R+ +RH N SVH+SPCF + +GD V GE RPLSKT
Sbjct: 90 YSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 70.1 bits (164), Expect = 2e-11
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
+L KYNRF KRH+N+ HLS ++GDIV I ECRP+SKTVRFNV+KV
Sbjct: 62 FLKKYNRFVKRHKNIPAHLSNLLT-CKVGDIVIIAECRPISKTVRFNVIKV 111
Score = 58.0 bits (134), Expect = 1e-07
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +1
Query: 139 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYL 252
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYL 60
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 65.3 bits (152), Expect = 7e-10
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3
Query: 294 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF + KV
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRFIMFKV 71
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 404
Y+ K+ R+EKR R + HL C DV +GD V I ECRPLSKT+ F V++
Sbjct: 57 YMQKFERYEKRTRRYAAHLPSCIGDVNVGDSVRIMECRPLSKTITFCVIE 106
Score = 44.0 bits (99), Expect = 0.002
Identities = 14/37 (37%), Positives = 29/37 (78%)
Frame = +1
Query: 142 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYL 252
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHI 55
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 401
+LPKY R+E R ++ +L C +D++ GD V IGE RPLSKT F VL
Sbjct: 54 WLPKYERYELRRTRITAYLPECLKDIKEGDYVLIGETRPLSKTKHFVVL 102
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 55.6 bits (128), Expect = 6e-07
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +1
Query: 70 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 249
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Score = 50.4 bits (115), Expect = 2e-05
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
Y KY R+E+R + H PC D + GD V I ECRPLSKT F V++V
Sbjct: 62 YDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVIEV 111
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 55.6 bits (128), Expect = 6e-07
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
Y KYNR+E+R + + HL C V+ GD+V IGE P+SKTV+F VL V
Sbjct: 62 YDKKYNRYERRSKKIHAHLPDCI-SVKEGDVVVIGETMPISKTVKFTVLGV 111
Score = 38.7 bits (86), Expect = 0.069
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 142 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 255
D CP+ G + +RG +L GVV K + +R +V++ YL+
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLY 61
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 53.6 bits (123), Expect = 2e-06
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 401
Y PKY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F VL
Sbjct: 85 YSPKYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISFVVL 132
Score = 39.1 bits (87), Expect = 0.052
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +1
Query: 85 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHTYP 264
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LH P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 52.0 bits (119), Expect = 7e-06
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3
Query: 258 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 383
+PKY+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 55 VPKYDRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
Score = 46.8 bits (106), Expect = 3e-04
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +1
Query: 91 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 249
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREY 51
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +3
Query: 264 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 404
KY R+EKR + H C ++GDIVTI ECRP+SKT F V+K
Sbjct: 59 KYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSFVVVK 104
Score = 48.8 bits (111), Expect = 6e-05
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +1
Query: 85 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYL 252
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYM 54
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 401
Y+ KYNR+E+R + M V + C +V+ GD V I E RPLSKT+ + V+
Sbjct: 58 YIRKYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTIAWVVI 105
Score = 35.5 bits (78), Expect = 0.64
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +1
Query: 85 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 255
KN+G+ P ++ D CP+ G++ +R ++L V+K++M + V+ ++LH
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLH 57
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = -3
Query: 264 WVGMKVIAADHDSSLHLHFLNDAGEDAAADRNVTSEGTLLVNVGTLNRLSGSFE 103
W M+VI++D+D ++H N G+D +D N TSE T VNV T N FE
Sbjct: 108 WNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFE 161
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 85 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHTYP 264
+N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Score = 42.7 bits (96), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 404
Y+PKY R + + VH+ C + ++ GD V ECR L+KT+ F +++
Sbjct: 57 YIPKYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISFVIVE 105
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 85 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRR 243
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKR 51
Score = 41.5 bits (93), Expect = 0.010
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 264 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 404
KY R ++ + + PC + +IGDI+TI ECRPL+K F V++
Sbjct: 59 KYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSFVVIE 104
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 42.3 bits (95), Expect = 0.006
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 401
Y KY R+E R + V + PC V+ GD V + E RPL+K+V F V+
Sbjct: 59 YNEKYKRYEVRRKKKHVRVPPCI-PVKPGDEVIVAETRPLAKSVSFVVI 106
Score = 33.9 bits (74), Expect = 2.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 142 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 255
D CP+ G + +RG++L V+K+KM V +YL+
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLY 58
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 40.7 bits (91), Expect = 0.017
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 249 PSYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
P Y K+ R+ + + H+ P DV GD V ECRP++K+V F V++V
Sbjct: 56 PVYFTKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSFVVVEV 107
Score = 39.5 bits (88), Expect = 0.039
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 85 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRD 246
+ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKE 54
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 40.3 bits (90), Expect = 0.023
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 261 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 383
PKY ++ KR + VH ++GDIV I +CRP+SKT
Sbjct: 47 PKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQCRPISKT 85
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 38.7 bits (86), Expect = 0.069
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 261 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
PKY + KR + VH V++GD++ ECRPLSK F++ KV
Sbjct: 35 PKYRKIVKRFKKYIVHDES--NAVKVGDMIEAIECRPLSKRKSFSLHKV 81
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 38.7 bits (86), Expect = 0.069
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 261 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
P Y ++ KR + H + +IGD+V I E RPLSKT R+ V+++
Sbjct: 30 PLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETRPLSKTKRWRVVRI 76
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 37.1 bits (82), Expect = 0.21
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +3
Query: 261 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 404
PKY++F ++ R H + EIGDIV I E R LSKT F VLK
Sbjct: 30 PKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEESRKLSKTKAF-VLK 74
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 36.7 bits (81), Expect = 0.28
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 273 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
RF+KR + + H E+GD V I ECRP+SKT F +++V
Sbjct: 50 RFKKR-KKFNTHDEKNL--AEVGDFVKIAECRPISKTKHFRLVEV 91
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 36.7 bits (81), Expect = 0.28
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 261 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
P+Y + KR + +H +V++GD V ECRPLSK F + V
Sbjct: 31 PRYRKIVKRFKKYLIHDER--NEVKVGDTVVAVECRPLSKRKSFRLKSV 77
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 33.9 bits (74), Expect = 2.0
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 46 RKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTG 198
R G +R+D + H N G RE + GT+ K TG S G +TG
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTG 89
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 291 RNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
++ H + +GDIV I E RPLSKT R+ V+K+
Sbjct: 49 KSKKYHAHDEHNECRVGDIVMIRETRPLSKTKRWVVVKI 87
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 33.5 bits (73), Expect = 2.6
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 267 YNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
Y ++ KR + +SVH S EIGDIV E +SKT + ++K+
Sbjct: 36 YGKYIKRSKKLSVHDSK--NKAEIGDIVECAESLKISKTKSWILIKI 80
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 336 IGDIVTIGECRPLSKTVRFNVLKV 407
+GD VTI CRP S T RF ++K+
Sbjct: 51 VGDAVTIQPCRPRSATKRFEIIKI 74
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 261 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
P Y + KR + H P ++GD+V I E RP+SK RF VL++
Sbjct: 30 PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEIIESRPISKRKRFRVLRL 76
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 264 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
KY ++ K+ H +IGDIV I E RPLSKT R+ + +V
Sbjct: 38 KYGKYVKKTSVFKAHDEK--NQAKIGDIVKIRETRPLSKTKRWALAEV 83
>UniRef50_Q287X1 Cluster: Large protein; n=1; Beilong virus|Rep: Large
protein - Beilong virus
Length = 2172
Score = 32.7 bits (71), Expect = 4.5
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 219 AENYRDPPRLPSYLPKYNRFEKR-HRNMSVHLSPCFRDVEIG 341
++++R L YLP NR+E HR + V+ + C++ EIG
Sbjct: 1712 SDDFRKLQGLEEYLPTKNRWEAHVHRRVGVNSTSCYKACEIG 1753
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 32.7 bits (71), Expect = 4.5
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 267 YNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 383
Y +F R + VH + +V GDIV I ECRP+SKT
Sbjct: 34 YKKFINRTTKIYVHDTNNISNV--GDIVEITECRPISKT 70
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 32.7 bits (71), Expect = 4.5
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 339 GDIVTIGECRPLSKTVRFNVLKV 407
GD+V I ECRP+SKT + V KV
Sbjct: 60 GDLVEIEECRPISKTKSWRVAKV 82
>UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 342
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 7 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 186
EK Q + +N K+ +H + G+ + +E+I+ + DKK FTG + + G
Sbjct: 9 EKIIFSQLSTLINGLDCSKQSLEQHKEQEGIVYVKDKESIQSSSTDKKISFTGKI-LNGG 67
Query: 187 IL 192
IL
Sbjct: 68 IL 69
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
Y+P + HR+ H + GD+V I +CRP+SKT F V ++
Sbjct: 38 YMPAILKEINFHRDFYTHDE--MMACQEGDVVRIEQCRPISKTKHFAVAEI 86
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 261 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
PKY +F ++ + H + +GD VTI EC P SK ++++ +
Sbjct: 35 PKYKKFVRKSTKVMAHDAD--NACGVGDRVTISECTPFSKRKTWSLVSI 81
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 7.9
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 44 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 163
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
>UniRef50_Q7VK73 Cluster: UvrABC system protein C; n=1; Helicobacter
hepaticus|Rep: UvrABC system protein C - Helicobacter
hepaticus
Length = 621
Score = 31.9 bits (69), Expect = 7.9
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = -3
Query: 372 KVCIRRSLQYHQSPRP*SKATNARTYSCAVSRTYCIWVGMKVIAADHDSSLHLHFLNDAG 193
K CI Q H+ P P + +TY+ +++ + K + +S +H N
Sbjct: 174 KACIFH--QIHKCPAPCENKVSIQTYAQTIAQGIALIEDKKALLKILESKMHTLSHNLQF 231
Query: 192 EDAAADRNVTSEGTLLVNVGTLNRLSGSFE 103
E+AA R+ + T + N ++ +SG ++
Sbjct: 232 EEAAIMRDRIQKITQMKNQSIIDMMSGDYD 261
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,448,873
Number of Sequences: 1657284
Number of extensions: 8976787
Number of successful extensions: 22299
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 21621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22271
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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