Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00501
         (485 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   111   2e-26
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   2.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.3  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           22   9.7  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   9.7  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  111 bits (266), Expect = 2e-26
 Identities = 53/84 (63%), Positives = 66/84 (78%)
 Frame = +1

Query: 1   QTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 180
           Q  +AFQKQ  + LNRK   ++K +R H ++GLGFKTP+EAI GTYIDKKCPFTG++SIR
Sbjct: 5   QNIRAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIR 64

Query: 181 GRILTGVVQKMKMQRTIVIRRDYL 252
           GRILTGVV+K  +   + IRRDYL
Sbjct: 65  GRILTGVVRKCIV--LLYIRRDYL 86



 Score = 93.1 bits (221), Expect = 5e-21
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = +3

Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 404
           ++ KY+ FEKR+RNM +HLSPCFRDVE GDIVT+GECRPLSKTVRFNVLK
Sbjct: 88  FIRKYDTFEKRNRNMRLHLSPCFRDVEAGDIVTLGECRPLSKTVRFNVLK 137


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 195  GEDAAADRNVTSEGTLLVNVGT 130
            GED   D+   S+GTLL  +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 244 DYLHTYPNTIGSRNGT 291
           DY+   P+TIG  +GT
Sbjct: 733 DYMRRNPSTIGQMSGT 748


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 72  HASP*ECWFRLQNSQRGD*GYLH 140
           H  P EC   + +S     GYLH
Sbjct: 82  HYEPMECHSAVNSSSNSSTGYLH 104


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 67  SSSCHLSCSGKRWPVS 20
           +SSC L  +G RW VS
Sbjct: 447 ASSCFLPEAGARWDVS 462


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,584
Number of Sequences: 2352
Number of extensions: 10142
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)