Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00501
         (485 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   130   1e-30
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   130   1e-30
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   120   1e-27

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  130 bits (314), Expect = 1e-30
 Identities = 65/88 (73%), Positives = 74/88 (84%), Gaps = 3/88 (3%)
 Frame = +1

Query: 1   QTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 171
           Q E+AFQKQ  V LNRK   G  K+K +R  ++VGLGFKTPREAI+GTYIDKKCP+TG+V
Sbjct: 4   QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63

Query: 172 SIRGRILTGVVQKMKMQRTIVIRRDYLH 255
            IRGRILTGVV+K KMQRTIVIRRDYLH
Sbjct: 64  RIRGRILTGVVRKAKMQRTIVIRRDYLH 91



 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = +3

Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
           ++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 92  FVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  130 bits (314), Expect = 1e-30
 Identities = 65/88 (73%), Positives = 74/88 (84%), Gaps = 3/88 (3%)
 Frame = +1

Query: 1   QTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 171
           Q E+AFQKQ  V LNRK   G  K+K +R  ++VGLGFKTPREAI+GTYIDKKCP+TG+V
Sbjct: 4   QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63

Query: 172 SIRGRILTGVVQKMKMQRTIVIRRDYLH 255
            IRGRILTGVV+K KMQRTIVIRRDYLH
Sbjct: 64  RIRGRILTGVVRKAKMQRTIVIRRDYLH 91



 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = +3

Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
           ++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 92  FVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  120 bits (289), Expect = 1e-27
 Identities = 57/86 (66%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   QTEKAFQKQ-ATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSI 177
           QTE++F+KQ A V + RK    +K  R ++ +GLGF+ P EAI+GTYIDKKCP+TG+V I
Sbjct: 5   QTERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRI 64

Query: 178 RGRILTGVVQKMKMQRTIVIRRDYLH 255
           RGRILTGVV+K KMQRTIVIRRDYLH
Sbjct: 65  RGRILTGVVRKAKMQRTIVIRRDYLH 90



 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = +3

Query: 255 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 407
           ++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 91  FVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,973,232
Number of Sequences: 53049
Number of extensions: 432191
Number of successful extensions: 971
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)