Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00500X
         (443 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000EB45EA Cluster: Uncharacterized protein C19orf18...    33   2.1  
UniRef50_Q8NSI6 Cluster: Phosphomannomutase; n=4; Corynebacteriu...    32   6.4  
UniRef50_Q0YNA5 Cluster: Fibronectin, type III precursor; n=1; G...    32   6.4  
UniRef50_A5GJ21 Cluster: Possible amidophosphoribosyltransferase...    32   6.4  

>UniRef50_UPI0000EB45EA Cluster: Uncharacterized protein C19orf18
           precursor.; n=3; Canis lupus familiaris|Rep:
           Uncharacterized protein C19orf18 precursor. - Canis
           familiaris
          Length = 220

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = -3

Query: 411 EVPTWICLGRPKGSRLVDTSTGVPFARKVSATRML*KQKGVALKPARGVGMSFI--LTHK 238
           E P  +CL      + V+ +T +   +++  +  + KQKG+  +P    G SFI   TH+
Sbjct: 17  EYPILLCLPYGGEFKPVELATDLMSYKQLQTSANVTKQKGLTSRPRELPGFSFISLSTHR 76

Query: 237 KVPIPP*R 214
           K P  P R
Sbjct: 77  KTPSAPER 84


>UniRef50_Q8NSI6 Cluster: Phosphomannomutase; n=4;
           Corynebacterium|Rep: Phosphomannomutase -
           Corynebacterium glutamicum (Brevibacterium flavum)
          Length = 575

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +2

Query: 284 RATPFCFYNMRVAETLRAKGTPVLVSTRRLPFG----RPRQIQVGTSGCRS 424
           R  PFCF   R+ +T  A  + ++V  R+   G      RQ+  GT+G R+
Sbjct: 11  REIPFCFVRRRIRKTCSAVESSLIVIPRKQRIGVFMDESRQLSFGTAGLRA 61


>UniRef50_Q0YNA5 Cluster: Fibronectin, type III precursor; n=1;
           Geobacter sp. FRC-32|Rep: Fibronectin, type III
           precursor - Geobacter sp. FRC-32
          Length = 575

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 12/50 (24%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = +3

Query: 105 GDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTF-REGSGPSYELV 251
           G++++ L  ++ YFS+ GR++ ++ + GQ   +++  + + G   +Y++V
Sbjct: 495 GNYLVTLKFAEIYFSAAGRRVFNVAINGQTVISNLDIYAKVGKNVAYDVV 544


>UniRef50_A5GJ21 Cluster: Possible amidophosphoribosyltransferase;
           n=3; Synechococcus|Rep: Possible
           amidophosphoribosyltransferase - Synechococcus sp.
           (strain WH7803)
          Length = 220

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 143 ISLRNVQFYHPVPWVEKVWYRGVRKQLGVLSLR 45
           ++   VQ  HP PW    WY G  +QL +L LR
Sbjct: 44  LAAAGVQGQHPCPWTAAGWYDGALRQL-ILQLR 75


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,619,814
Number of Sequences: 1657284
Number of extensions: 9701563
Number of successful extensions: 22175
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22175
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)