Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00500X
         (443 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      25   0.24 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   2.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   4.0  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   6.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   6.9  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 119 YHPVPWVEKVWYRGVRK 69
           + P+ WV K+W  G+RK
Sbjct: 262 FAPIRWVAKLWDSGLRK 278


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
 Frame = -2

Query: 337 CTQGLCDPHV-----IEAKRCGSEASPRGRHVIHTN 245
           CT    +P V     I A+R G + SPR   + HT+
Sbjct: 321 CTNSCMNPVVYGVFNIRARRTGRKVSPRVNTIKHTS 356


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
 Frame = -2

Query: 337 CTQGLCDPHV-----IEAKRCGSEASPRGRHVIHTN 245
           CT    +P V     I A+R G + SPR   + HT+
Sbjct: 321 CTNSCMNPVVYGVFNIRARRTGRKVSPRVNTIKHTS 356


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 96  LHPGDWMIKLNISQGYFSSI 155
           LHP    +KL+ S+GY  S+
Sbjct: 164 LHPNIVKLKLDTSEGYTLSV 183


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 224 LPEGTDTGPLVLTLKKYRRNF 162
           +  G D G LVL L  Y R+F
Sbjct: 251 IERGADPGKLVLGLGVYGRSF 271


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 46  DLVQLSKIENWTH 8
           D V ++K+E W H
Sbjct: 208 DFVAITKLEQWNH 220


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 55  KTPNCFRTPRYQT 93
           +T  CF+ PRY T
Sbjct: 300 QTAICFKAPRYHT 312


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 322 CDPHVIEAKRCGS 284
           CD +V E K CG+
Sbjct: 44  CDNNVAELKTCGN 56


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 322 CDPHVIEAKRCGS 284
           CD +V E K CG+
Sbjct: 44  CDNNVAELKTCGN 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,716
Number of Sequences: 336
Number of extensions: 2226
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)