Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00500X
(443 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48723| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.99
SB_47891| Best HMM Match : RVT_1 (HMM E-Value=1.3e-09) 30 0.99
SB_34554| Best HMM Match : RVT_1 (HMM E-Value=0.2) 30 0.99
SB_29557| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.99
SB_29228| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.99
SB_23509| Best HMM Match : XET_C (HMM E-Value=3.6) 30 0.99
SB_43286| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.99
SB_2750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.99
SB_2226| Best HMM Match : RVT_1 (HMM E-Value=4.6e-09) 30 0.99
SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 29 2.3
SB_51930| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_1905| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_1158| Best HMM Match : Toxin_24 (HMM E-Value=0.57) 27 5.3
SB_32860| Best HMM Match : Lipase_GDSL (HMM E-Value=1.1) 27 5.3
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
>SB_48723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S + G+ P+
Sbjct: 93 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQNGAMPA 148
>SB_47891| Best HMM Match : RVT_1 (HMM E-Value=1.3e-09)
Length = 969
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S + G+ P+
Sbjct: 171 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQNGAMPA 226
>SB_34554| Best HMM Match : RVT_1 (HMM E-Value=0.2)
Length = 671
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S + G+ P+
Sbjct: 62 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQNGAMPA 117
>SB_29557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S + G+ P+
Sbjct: 134 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQNGAMPA 189
>SB_29228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S + G+ P+
Sbjct: 134 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQNGAMPA 189
>SB_23509| Best HMM Match : XET_C (HMM E-Value=3.6)
Length = 362
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S + G+ P+
Sbjct: 134 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQNGAMPA 189
>SB_43286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S + G+ P+
Sbjct: 171 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQNGAMPA 226
>SB_2750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S + G+ P+
Sbjct: 171 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQNGAMPA 226
>SB_2226| Best HMM Match : RVT_1 (HMM E-Value=4.6e-09)
Length = 944
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S + G+ P+
Sbjct: 171 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQNGAMPA 226
>SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 1001
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -3
Query: 378 KGSRLVDTSTGVPFARKVSATRML*KQKGVALKPAR 271
+GS +DTSTG PF+ +S TR L +Q V+++ R
Sbjct: 380 QGSSDLDTSTGSPFS--MSPTRALQRQASVSVETRR 413
>SB_51930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
LFS S+P D +K I Q F G +++ +LEG+YQ T +S ++G S
Sbjct: 134 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASQKGGHAS 189
>SB_1905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 66 LFSDTSVPNFLHPGDWMIKLNISQGYFSSIGRKISSILLEGQYQGT 203
LFS S+P D +K I Q F G +++ +LEG+YQ T
Sbjct: 134 LFSSPSLPVDARVSD-KLKAKIWQNEFVEFGLLLANPILEGKYQLT 178
>SB_1158| Best HMM Match : Toxin_24 (HMM E-Value=0.57)
Length = 497
Score = 27.5 bits (58), Expect = 5.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 337 CTQGLCDPHVIEAKRCG 287
C+ LC+P+ EA+RCG
Sbjct: 19 CSGKLCEPNEFEARRCG 35
>SB_32860| Best HMM Match : Lipase_GDSL (HMM E-Value=1.1)
Length = 263
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 117 IKLNISQGYFSSIGRKISSILLEGQYQGTSISTFREGSGPS 239
+K I Q F G +++ +LEG+YQ T +S + GS P+
Sbjct: 145 LKAKIWQNEFVEFGLLLANPILEGKYQLT-LSASKNGSMPA 184
>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2630
Score = 27.1 bits (57), Expect = 7.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 325 LCDPHVIEAKRCGSEASPRGRHVIHTNS 242
+C PH++ A+ G + S GR ++ N+
Sbjct: 231 VCRPHIVRARLVGGKTSTEGRVELYYNN 258
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,284,559
Number of Sequences: 59808
Number of extensions: 296530
Number of successful extensions: 719
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 871599479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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