Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00500X
         (443 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   0.28 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   0.28 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   3.5  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 225 PP*RY*YWSLGTDPQEVSTKFCDRY*KNI--PEKCSILS 115
           PP +   W+   + Q ++TK+  RY  NI  PE C + +
Sbjct: 96  PPNKLQQWNEDLNWQPIATKYLRRYEDNIFLPEDCLLFT 134


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 225 PP*RY*YWSLGTDPQEVSTKFCDRY*KNI--PEKCSILS 115
           PP +   W+   + Q ++TK+  RY  NI  PE C + +
Sbjct: 111 PPNKLQQWNEDLNWQPIATKYLRRYEDNIFLPEDCLLFT 149


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 84  VPNFLHPGDWMIKLNISQGYFSSIGRKIS 170
           +PNF   G W  ++++ Q     IG+ ++
Sbjct: 232 LPNFPSSGHWQDQMSLPQMLADKIGKMVN 260


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 372 SRLVDTSTGVPFARKVSATR 313
           ++L DTS    F RKV AT+
Sbjct: 230 TKLPDTSMAKSFVRKVHATK 249


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 408 VPTWICLGRPKGSRLVDTST 349
           V  WI  GR   SRL+D  T
Sbjct: 482 VYAWIGAGRDSDSRLLDLCT 501


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,516
Number of Sequences: 438
Number of extensions: 2867
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)