Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00498
         (737 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q59LF8 Cluster: Putative uncharacterized protein; n=1; ...    38   0.34 
UniRef50_Q7RPL9 Cluster: Putative uncharacterized protein PY0143...    34   4.2  

>UniRef50_Q59LF8 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 447

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -3

Query: 249 NYKKTN*NRTDLIHDDHKIVNLFNRN*FINLTFFFCERPISY 124
           N+ K N     L  DD+K++NLFN N  I LT  F + P+++
Sbjct: 302 NFTKLNLKTYYLYQDDYKLINLFNFNNLIKLTIDFGQSPLNF 343


>UniRef50_Q7RPL9 Cluster: Putative uncharacterized protein PY01439;
           n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01439 - Plasmodium yoelii yoelii
          Length = 4099

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
 Frame = -3

Query: 417 NSVFL-YQT*FL--NDYNILNK*CFTSVFFTYTAQKDSIG*L*YYYNSLEIVCFDDVIRN 247
           NS+FL Y   FL  N  N LN   +TS+F T+T   D I     YY  LE   F  +   
Sbjct: 224 NSLFLIYSPNFLEKNTQNKLNNNKYTSIFQTFT---DGIY---KYYQKLENYSFSKI--- 274

Query: 246 YKKTN*NRTDLIHDDHKIVNLFNRN 172
           Y   N N  +L++D H   NL+ +N
Sbjct: 275 YGSDNINSNNLLYDIHH--NLYKKN 297


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,063,711
Number of Sequences: 1657284
Number of extensions: 12005631
Number of successful extensions: 21231
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21231
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)