Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00497X
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.26 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   3.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 411 GAELSLPCEVDGYPQPENVYWSKDGVRIASGD 506
           G++ ++ C+ DG+P+P  V W K    ++ GD
Sbjct: 713 GSDAAVECKADGFPRPV-VTW-KRATGVSPGD 742



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 399 TLTAGAELSLPCEVDGYPQPENVYWSKDG 485
           ++  G  +S+ C V     P N+ W+ +G
Sbjct: 614 SINEGDGVSVQCTVSKGDYPLNISWTLNG 642


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 478 LDQYTFSGCGYP 443
           L Q+ F GCG+P
Sbjct: 572 LAQFNFCGCGWP 583


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 481 SLDQYTFSGCGYP 443
           +L ++ F GCG+P
Sbjct: 570 ALSEFNFCGCGWP 582


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 441 DGYPQPENVYWSKDGVRIASGDK 509
           +GY  PE++++    V I + D+
Sbjct: 43  EGYHTPESLHYEGRAVDITTSDR 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,982
Number of Sequences: 336
Number of extensions: 2474
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)