Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00493X
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    25   0.68 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.3  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 261 CVLVSINNISVHYSIAYDNINSVHLL 338
           CV V++      Y+I YDN+N   +L
Sbjct: 11  CVSVALARPEDQYTIKYDNVNLKEIL 36


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 47  RKKLMLNTDKYYSSLLAYTSTVRHSSLSR 133
           ++K  ++  +  + L+AYTS   HSS+ R
Sbjct: 169 KEKPEMSDSEIVAKLVAYTSAQSHSSVER 197


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 58  NVKYRQILFIITSLYVYCT 114
           N+KYR+  F ++    +CT
Sbjct: 390 NLKYRETYFRLSKTKTFCT 408


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 390 GFISIKYNSVYSL 428
           GF++I Y ++YSL
Sbjct: 365 GFLNIDYGTLYSL 377


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,726
Number of Sequences: 336
Number of extensions: 2992
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)