Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00490
(837 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51039| Best HMM Match : OAR (HMM E-Value=0.92) 29 4.7
SB_47439| Best HMM Match : E6 (HMM E-Value=3.2) 29 4.7
SB_10674| Best HMM Match : E6 (HMM E-Value=3.2) 29 4.7
SB_55200| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 29 6.2
SB_53232| Best HMM Match : OAR (HMM E-Value=0.92) 29 6.2
SB_49614| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 29 6.2
SB_40579| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 29 6.2
SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_25610| Best HMM Match : MAT_Alpha1 (HMM E-Value=7.2) 29 6.2
SB_10701| Best HMM Match : DSPc (HMM E-Value=0) 28 8.2
>SB_51039| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 545
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHVTRRMKCQGGQRCLSEEAEKYIIKYIMFVQS 269
E Y ++ +++ + F+++K+ LH + R + S EAE ++IK +FV S
Sbjct: 380 EGYACRQQDEIQL-EFFDVAKASLHVTILHRHAVESKDGITSTEAEPHLIKEHLFVVS 436
>SB_47439| Best HMM Match : E6 (HMM E-Value=3.2)
Length = 436
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHVTRRMKCQGGQRCLSEEAEKYIIKYIMFVQS 269
E Y ++ +++ + F+++K+ LH + R + S EAE ++IK +FV S
Sbjct: 29 EGYACRQQDEIQL-EFFDVAKASLHVTILHRHAVESKDGITSTEAEPHLIKEHLFVVS 85
>SB_10674| Best HMM Match : E6 (HMM E-Value=3.2)
Length = 436
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHVTRRMKCQGGQRCLSEEAEKYIIKYIMFVQS 269
E Y ++ +++ + F+++K+ LH + R + S EAE ++IK +FV S
Sbjct: 29 EGYACRQQDEIQL-EFFDVAKASLHVTILHRHAVESKDGITSTEAEPHLIKEHLFVVS 85
>SB_55200| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 929
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHVTRRMKCQGGQRCLSEEAEKYIIKYIMFVQS 269
E Y ++ ++ ++ F+++K+ LH + R + S EAE ++IK +FV S
Sbjct: 521 EGYACRQQDEIQ-SEFFDVTKASLHVTILHRHAVESKDGITSTEAEPHLIKEHLFVVS 577
>SB_53232| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 806
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHVTRRMKCQGGQRCLSEEAEKYIIKYIMFVQS 269
E Y ++ ++ ++ F+++K+ LH + R + S EAE ++IK +FV S
Sbjct: 543 EGYACRQQDEIQ-SEFFDVTKASLHVTILHRHAVESKDGITSTEAEPHLIKEHLFVVS 599
>SB_49614| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 838
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHVTRRMKCQGGQRCLSEEAEKYIIKYIMFVQS 269
E Y ++ ++ ++ F+++K+ LH + R + S EAE ++IK +FV S
Sbjct: 430 EGYACRQQDEIQ-SEFFDVTKASLHVTILHRHAVESKDGITSTEAEPHLIKEHLFVVS 486
>SB_40579| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 929
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHVTRRMKCQGGQRCLSEEAEKYIIKYIMFVQS 269
E Y ++ ++ ++ F+++K+ LH + R + S EAE ++IK +FV S
Sbjct: 521 EGYACRQQDEIQ-SEFFDVTKASLHVTILHRHAVESKDGITSTEAEPHLIKEHLFVVS 577
>SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHVTRRMKCQGGQRCLSEEAEKYIIKYIMFVQS 269
E Y ++ ++ ++ F+++K+ LH + R + S EAE ++IK +FV S
Sbjct: 307 EGYACRQQDEIQ-SEFFDVTKASLHVTILHRHAVESKDGITSTEAEPHLIKEHLFVVS 363
>SB_25610| Best HMM Match : MAT_Alpha1 (HMM E-Value=7.2)
Length = 344
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHVTRRMKCQGGQRCLSEEAEKYIIKYIMFVQS 269
E Y ++ ++ ++ F+++K+ LH + R + S EAE ++IK +FV S
Sbjct: 152 EGYACRQQDEIQ-SEFFDVAKASLHVTILHRHAVESKDGITSTEAEPHLIKEHLFVVS 208
>SB_10701| Best HMM Match : DSPc (HMM E-Value=0)
Length = 365
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 96 EAYEIEKKSLVEIAKQFNISKSVLHRHV-TRRMKCQGGQRCLSEEAEKY 239
EAYE KK I+ FN +LH T R+ + +RC ++A+ +
Sbjct: 288 EAYEYVKKRRSVISPNFNFMGQLLHYETQTMRLDNELEERCDDDDAKPF 336
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,801,388
Number of Sequences: 59808
Number of extensions: 461686
Number of successful extensions: 1084
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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