Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00490
         (837 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g26780.1 68417.m03857 co-chaperone grpE family protein simila...    28   6.7  
At1g55020.1 68414.m06284 lipoxygenase (LOX1) identical to SP|Q06327    28   6.7  

>At4g26780.1 68417.m03857 co-chaperone grpE family protein similar
           to chaperone GrpE type 2 [Nicotiana tabacum] GI:3851640;
           contains Pfam profile PF01025: co-chaperone GrpE
          Length = 327

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 78  ILKTAIEAYEIEKKSLVEIAKQFNISK 158
           +LKT +E  E+ +K L E+ K+F + K
Sbjct: 235 LLKTLLEGVEMTEKQLAEVFKKFGMEK 261


>At1g55020.1 68414.m06284 lipoxygenase (LOX1) identical to SP|Q06327
          Length = 859

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 239 HNKIYYVCSEWGYPLDSY 292
           H +++Y+C+ W YP   Y
Sbjct: 136 HGRVHYICNSWIYPAKHY 153


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,724,596
Number of Sequences: 28952
Number of extensions: 325065
Number of successful extensions: 759
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)