Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00489
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 132 4e-31
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 132 4e-31
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 132 4e-31
U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated p... 36 0.032
U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein. 36 0.032
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 32 0.39
Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical p... 30 1.6
Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical p... 30 1.6
Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical p... 30 1.6
Z73969-20|CAA98241.1| 643|Caenorhabditis elegans Hypothetical p... 28 6.4
U21487-1|AAA96949.1| 643|Caenorhabditis elegans ribonucleoprote... 28 6.4
L41729-1|AAC41575.1| 643|Caenorhabditis elegans Ro ribonucleopr... 28 6.4
L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncog... 28 6.4
AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isofor... 28 6.4
AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isofor... 28 6.4
AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. 28 6.4
AL021479-8|CAA16325.1| 643|Caenorhabditis elegans Hypothetical ... 28 6.4
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 6.4
AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 28 6.4
AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell... 28 6.4
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 8.5
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 132 bits (318), Expect = 4e-31
Identities = 58/84 (69%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 MDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRL 690
+D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMSCNLI GM+QRL
Sbjct: 220 LDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRL 279
Query: 691 DKMRKQAFASVCLFGEDNNSTISG 762
+K++K AFAS+ LFG DNNSTISG
Sbjct: 280 EKLKKNAFASMILFGTDNNSTISG 303
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 195 QHVLDPSVRSSLINVQRWF 251
Q+VLD + R S++NV RWF
Sbjct: 118 QYVLDANARKSIVNVTRWF 136
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 132 bits (318), Expect = 4e-31
Identities = 58/84 (69%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 MDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRL 690
+D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMSCNLI GM+QRL
Sbjct: 228 LDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRL 287
Query: 691 DKMRKQAFASVCLFGEDNNSTISG 762
+K++K AFAS+ LFG DNNSTISG
Sbjct: 288 EKLKKNAFASMILFGTDNNSTISG 311
Score = 78.2 bits (184), Expect = 6e-15
Identities = 39/83 (46%), Positives = 56/83 (67%)
Frame = +3
Query: 3 ASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 182
A +V P + F+K+ VE+ K++L L+VLD L+ +T+LV ER++LADV V L
Sbjct: 62 AVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDL 121
Query: 183 LHAFQHVLDPSVRSSLINVQRWF 251
L AFQ+VLD + R S++NV RWF
Sbjct: 122 LPAFQYVLDANARKSIVNVTRWF 144
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 132 bits (318), Expect = 4e-31
Identities = 58/84 (69%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 MDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRL 690
+D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMSCNLI GM+QRL
Sbjct: 253 LDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRL 312
Query: 691 DKMRKQAFASVCLFGEDNNSTISG 762
+K++K AFAS+ LFG DNNSTISG
Sbjct: 313 EKLKKNAFASMILFGTDNNSTISG 336
Score = 78.2 bits (184), Expect = 6e-15
Identities = 39/83 (46%), Positives = 56/83 (67%)
Frame = +3
Query: 3 ASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 182
A +V P + F+K+ VE+ K++L L+VLD L+ +T+LV ER++LADV V L
Sbjct: 87 AVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDL 146
Query: 183 LHAFQHVLDPSVRSSLINVQRWF 251
L AFQ+VLD + R S++NV RWF
Sbjct: 147 LPAFQYVLDANARKSIVNVTRWF 169
>U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated
protein 40 protein.
Length = 1415
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -3
Query: 311 PHRA*ASRRRPTLVAGGRRQEPTLNVYQRRTDARV*HVLESMQQCTEDNDIGKCDSLGNK 132
PH A +S RPT++A G RQ P + + V ++ C+ +D G+ D K
Sbjct: 1292 PHSAASSSSRPTIIAAGGRQVP-VGRATAQPRVNVANIYSPFASCSASSDAGESD---KK 1347
Query: 131 EGACEKM 111
G C +M
Sbjct: 1348 SGECMEM 1354
>U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein.
Length = 1415
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -3
Query: 311 PHRA*ASRRRPTLVAGGRRQEPTLNVYQRRTDARV*HVLESMQQCTEDNDIGKCDSLGNK 132
PH A +S RPT++A G RQ P + + V ++ C+ +D G+ D K
Sbjct: 1292 PHSAASSSSRPTIIAAGGRQVP-VGRATAQPRVNVANIYSPFASCSASSDAGESD---KK 1347
Query: 131 EGACEKM 111
G C +M
Sbjct: 1348 SGECMEM 1354
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 517 DDFKRVYSNEDEAKSIPYFWEKFDPENYSIW-YAEYKYPEELAKVFMSCNLITGMFQRLD 693
D+ V+ N+ + K P + KF PENY +W Y +E ++ ++S + ++ +
Sbjct: 42 DELLAVF-NKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYISRTEFSKLYAG-N 99
Query: 694 KMRKQAFASVCLFGEDNNSTIS 759
+RK A+ + E+ N +++
Sbjct: 100 VVRKVEDATHIVLPENENGSVT 121
>Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical
protein F32D8.12c protein.
Length = 383
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 770 HPHPEMVE--LLSSPNRQTDAKACLRILSNLWNIPVIRLQLMNT 645
HP P+ + + S P A + +L WNIPV R++L++T
Sbjct: 135 HPRPQFLSAAVCSFPTVHEAASTVVEVLQ--WNIPVARIELLDT 176
>Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical
protein F32D8.12b protein.
Length = 460
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 770 HPHPEMVE--LLSSPNRQTDAKACLRILSNLWNIPVIRLQLMNT 645
HP P+ + + S P A + +L WNIPV R++L++T
Sbjct: 212 HPRPQFLSAAVCSFPTVHEAASTVVEVLQ--WNIPVARIELLDT 253
>Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical
protein F32D8.12a protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 770 HPHPEMVE--LLSSPNRQTDAKACLRILSNLWNIPVIRLQLMNT 645
HP P+ + + S P A + +L WNIPV R++L++T
Sbjct: 226 HPRPQFLSAAVCSFPTVHEAASTVVEVLQ--WNIPVARIELLDT 267
>Z73969-20|CAA98241.1| 643|Caenorhabditis elegans Hypothetical
protein C12D8.11 protein.
Length = 643
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 KRSALVPAVAHQPQVSAVVGSLTLCAAPPTYDPKKYQE 346
K AL+ A P+++A++ +L +CA T+D K E
Sbjct: 122 KELALINAENRNPKMNAMIFTLAICARISTHDTTKKTE 159
>U21487-1|AAA96949.1| 643|Caenorhabditis elegans ribonucleoprotein
Ro autoantigenhomolog protein.
Length = 643
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 KRSALVPAVAHQPQVSAVVGSLTLCAAPPTYDPKKYQE 346
K AL+ A P+++A++ +L +CA T+D K E
Sbjct: 122 KELALINAENRNPKMNAMIFTLAICARISTHDTTKKTE 159
>L41729-1|AAC41575.1| 643|Caenorhabditis elegans Ro
ribonucleoprotein autoantigen protein.
Length = 643
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 KRSALVPAVAHQPQVSAVVGSLTLCAAPPTYDPKKYQE 346
K AL+ A P+++A++ +L +CA T+D K E
Sbjct: 122 KELALINAENRNPKMNAMIFTLAICARISTHDTTKKTE 159
>L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncogene
protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -3
Query: 458 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 279
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465
>AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isoform 3
protein.
Length = 769
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -3
Query: 458 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 279
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 365 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 421
>AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isoform 2
protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -3
Query: 458 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 279
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465
>AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -3
Query: 458 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 279
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465
>AL021479-8|CAA16325.1| 643|Caenorhabditis elegans Hypothetical
protein C12D8.11 protein.
Length = 643
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 KRSALVPAVAHQPQVSAVVGSLTLCAAPPTYDPKKYQE 346
K AL+ A P+++A++ +L +CA T+D K E
Sbjct: 122 KELALINAENRNPKMNAMIFTLAICARISTHDTTKKTE 159
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 18 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 146
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
>AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform b protein.
Length = 614
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -3
Query: 458 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 279
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 451 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 507
>AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform a protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -3
Query: 458 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 279
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 8.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 547 DEAKSIPYFWEKFDPENYSIWYAEY 621
D+ + +P WE+ D +NY +Y ++
Sbjct: 327 DDPRELPPGWEQVDDQNYGTFYVDH 351
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,589,822
Number of Sequences: 27780
Number of extensions: 371114
Number of successful extensions: 1107
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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