Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00487
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   10.0 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   10.0 
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   10.0 

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 512 SDGELQIFSLAEPNNLVLAFYSQSACLKQIDSGRSVGSTLLI 637
           +DG  Q    ++    V A +SQ+A L +   G  + ++LLI
Sbjct: 378 NDGNDQSVQSSKEIKSVFALHSQTAPLVEASLGEQLDTSLLI 419


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 512 SDGELQIFSLAEPNNLVLAFYSQSACLKQIDSGRSVGSTLLI 637
           +DG  Q    ++    V A +SQ+A L +   G  + ++LLI
Sbjct: 379 NDGNDQSVQSSKEIKSVFALHSQTAPLVEASLGEQLDTSLLI 420


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = -3

Query: 138 NARTFFQAHIFTVNWKY*TIQTRHK*IYFNPEIH 37
           NA+ +F+      +W+   +Q+ HK + +   +H
Sbjct: 15  NAKVYFEEGFKDDSWQKTWVQSEHKGVEYGKFVH 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,976
Number of Sequences: 2352
Number of extensions: 17653
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)