Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00484X
         (366 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   142   1e-34
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   142   1e-34
Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   139   1e-33
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   139   1e-33
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   139   1e-33
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   139   1e-33
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   139   1e-33
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...   135   1e-32
BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    38   0.003
AY047565-1|AAK77297.1|  461|Drosophila melanogaster GH07782p pro...    28   3.3  
AE014297-4559|AAF57020.1|  461|Drosophila melanogaster CG9747-PA...    28   3.3  
AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p pro...    27   5.7  
AY069273-1|AAL39418.1|  421|Drosophila melanogaster GM10003p pro...    27   5.7  
AY047497-1|AAK77229.1|  922|Drosophila melanogaster GH01043p pro...    27   5.7  
AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ...    27   5.7  
AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,...    27   5.7  
AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,...    27   5.7  
AE014297-2490|AAF55529.1|  922|Drosophila melanogaster CG8064-PA...    27   5.7  
AE014296-1525|AAF50362.1|  438|Drosophila melanogaster CG13307-P...    27   5.7  
AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA...    27   10.0 

>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  142 bits (344), Expect = 1e-34
 Identities = 62/74 (83%), Positives = 65/74 (87%)
 Frame = +1

Query: 34  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 213
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 214 YGSNKKTRHMLPNG 255
           YGSNK+TRHMLP G
Sbjct: 72  YGSNKRTRHMLPTG 85



 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +3

Query: 246 PKWFRKVLVHNVKELEI**CKQE-YCAEIAHGVSSR 350
           P  F+K LVHNV+ELE+   +   YC EIAHGVSS+
Sbjct: 83  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSK 118


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  142 bits (344), Expect = 1e-34
 Identities = 62/74 (83%), Positives = 65/74 (87%)
 Frame = +1

Query: 34  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 213
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 214 YGSNKKTRHMLPNG 255
           YGSNK+TRHMLP G
Sbjct: 72  YGSNKRTRHMLPTG 85



 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +3

Query: 246 PKWFRKVLVHNVKELEI**CKQE-YCAEIAHGVSSR 350
           P  F+K LVHNV+ELE+   +   YC EIAHGVSS+
Sbjct: 83  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSK 118


>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  139 bits (336), Expect = 1e-33
 Identities = 61/72 (84%), Positives = 63/72 (87%)
 Frame = +1

Query: 40  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 219
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 220 SNKKTRHMLPNG 255
           SNK+TRHMLP G
Sbjct: 61  SNKRTRHMLPTG 72



 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +3

Query: 246 PKWFRKVLVHNVKELEI**CKQE-YCAEIAHGVSSR 350
           P  F+K LVHNV+ELE+   +   YC EIAHGVSS+
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSK 105


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  139 bits (336), Expect = 1e-33
 Identities = 61/72 (84%), Positives = 63/72 (87%)
 Frame = +1

Query: 40  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 219
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 220 SNKKTRHMLPNG 255
           SNK+TRHMLP G
Sbjct: 61  SNKRTRHMLPTG 72



 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +3

Query: 246 PKWFRKVLVHNVKELEI**CKQE-YCAEIAHGVSSR 350
           P  F+K LVHNV+ELE+   +   YC EIAHGVSS+
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSK 105


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  139 bits (336), Expect = 1e-33
 Identities = 61/72 (84%), Positives = 63/72 (87%)
 Frame = +1

Query: 40  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 219
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 220 SNKKTRHMLPNG 255
           SNK+TRHMLP G
Sbjct: 61  SNKRTRHMLPTG 72



 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +3

Query: 246 PKWFRKVLVHNVKELEI**CKQE-YCAEIAHGVSSR 350
           P  F+K LVHNV+ELE+   +   YC EIAHGVSS+
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSK 105


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  139 bits (336), Expect = 1e-33
 Identities = 61/72 (84%), Positives = 63/72 (87%)
 Frame = +1

Query: 40  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 219
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 220 SNKKTRHMLPNG 255
           SNK+TRHMLP G
Sbjct: 61  SNKRTRHMLPTG 72



 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +3

Query: 246 PKWFRKVLVHNVKELEI**CKQE-YCAEIAHGVSSR 350
           P  F+K LVHNV+ELE+   +   YC EIAHGVSS+
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSK 105


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  139 bits (336), Expect = 1e-33
 Identities = 61/72 (84%), Positives = 63/72 (87%)
 Frame = +1

Query: 40  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 219
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 220 SNKKTRHMLPNG 255
           SNK+TRHMLP G
Sbjct: 61  SNKRTRHMLPTG 72



 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +3

Query: 246 PKWFRKVLVHNVKELEI**CKQE-YCAEIAHGVSSR 350
           P  F+K LVHNV+ELE+   +   YC EIAHGVSS+
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSK 105


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score =  135 bits (327), Expect = 1e-32
 Identities = 60/72 (83%), Positives = 62/72 (86%)
 Frame = +1

Query: 40  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 219
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRV RRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60

Query: 220 SNKKTRHMLPNG 255
           SNK+TRHMLP G
Sbjct: 61  SNKRTRHMLPTG 72



 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +3

Query: 246 PKWFRKVLVHNVKELEI 296
           P  F+K LVHNV+ELE+
Sbjct: 70  PTGFKKFLVHNVRELEV 86


>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +3

Query: 156 Y*QQSPQAIQGSILDAQHRLRFQQEDPSYAPKWFRKV 266
           Y QQS   +QG++ DAQHRLR +Q  P +A    ++V
Sbjct: 7   YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEV 43


>AY047565-1|AAK77297.1|  461|Drosophila melanogaster GH07782p
           protein.
          Length = 461

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 309 VCIIRFPAL*HCELGPYGTIWEHMTGLLVG-TVTDVGHQVLTLES 178
           +C++ +P     EL PY TIW    G + G  VT   H+  T +S
Sbjct: 124 ICLLTYPLR---ELNPYTTIWSFFVGGVAGFGVTAGAHRFWTHKS 165


>AE014297-4559|AAF57020.1|  461|Drosophila melanogaster CG9747-PA
           protein.
          Length = 461

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 309 VCIIRFPAL*HCELGPYGTIWEHMTGLLVG-TVTDVGHQVLTLES 178
           +C++ +P     EL PY TIW    G + G  VT   H+  T +S
Sbjct: 124 ICLLTYPLR---ELNPYTTIWSFFVGGVAGFGVTAGAHRFWTHKS 165


>AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p
           protein.
          Length = 1019

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 31  TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 144
           T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 841 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 878


>AY069273-1|AAL39418.1|  421|Drosophila melanogaster GM10003p
           protein.
          Length = 421

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 31  TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 144
           T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 243 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 280


>AY047497-1|AAK77229.1|  922|Drosophila melanogaster GH01043p
           protein.
          Length = 922

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 258 GTIWEHMTGLLVGTVTDVGHQVLTLESPADSVVNTSRFTPIPLKFVIAIRLMPDKSL 88
           GTI     G  V  VTD   +V++     D + N    TP  +K  +A RL  +K +
Sbjct: 259 GTIQRAGKGRTVNLVTDPSERVISCHGTNDLIENFYICTPDEVKKRLAKRLKKEKKV 315


>AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3
            protein.
          Length = 2422

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 31   TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 144
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2244 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2281


>AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,
            isoform D protein.
          Length = 2431

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 31   TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 144
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2253 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2290


>AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,
            isoform C protein.
          Length = 2410

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 31   TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 144
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2232 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2269


>AE014297-2490|AAF55529.1|  922|Drosophila melanogaster CG8064-PA
           protein.
          Length = 922

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 258 GTIWEHMTGLLVGTVTDVGHQVLTLESPADSVVNTSRFTPIPLKFVIAIRLMPDKSL 88
           GTI     G  V  VTD   +V++     D + N    TP  +K  +A RL  +K +
Sbjct: 259 GTIQRAGKGRTVNLVTDPSERVISCHGTNDLIENFYICTPDEVKKRLAKRLKKEKKV 315


>AE014296-1525|AAF50362.1|  438|Drosophila melanogaster CG13307-PA
           protein.
          Length = 438

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 161 TTESAGDSRVNT*CPTSVTVPTRRPVICSQ 250
           TTES+ DS V T  PT+VT P     +C+Q
Sbjct: 386 TTESSTDSTVTTETPTTVT-PLTPAQMCAQ 414


>AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA
            protein.
          Length = 1561

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 164  TESAGDSRVNT*CPTSVTVPTRRPVI-CSQMVP 259
            T+ AG ++ N   PTS+  P+  P+I C    P
Sbjct: 1011 TQQAGHAQANGSSPTSIQAPSATPIIDCKSNPP 1043


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,869,267
Number of Sequences: 53049
Number of extensions: 319657
Number of successful extensions: 832
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)