Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00484X
         (366 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    91   2e-19
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr...    27   3.1  
U39645-5|AAU05591.1|  345|Caenorhabditis elegans Hypothetical pr...    27   3.1  
U39645-4|AAU05592.1|  341|Caenorhabditis elegans Hypothetical pr...    27   3.1  
Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical pr...    27   5.4  
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    27   5.4  
AC024763-9|AAU20836.1|  404|Caenorhabditis elegans Hypothetical ...    26   7.2  
AC024763-8|AAK93863.1|  480|Caenorhabditis elegans Hypothetical ...    26   7.2  
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical ...    26   9.5  

>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 91.5 bits (217), Expect = 2e-19
 Identities = 37/62 (59%), Positives = 51/62 (82%)
 Frame = +1

Query: 70  IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 249
           +VKK+  +F RH+SDRY ++  +WRKP+GIDNRVRRRF+G   MP IG+GS+++TR +LP
Sbjct: 11  VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRRTRFVLP 70

Query: 250 NG 255
           NG
Sbjct: 71  NG 72



 Score = 33.9 bits (74), Expect = 0.036
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +3

Query: 246 PKWFRKVLVHNVKELEI**CKQ-EYCAEIAHGVSSRA 353
           P  ++KVLV NVK+L++   +  +Y  EI HGVS+++
Sbjct: 70  PNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKS 106


>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
            K07G5.3 protein.
          Length = 1202

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -1

Query: 183  ESPADSVVN-TSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLVCFFKKRD 13
            E P +S+   T R++ +P  +++ +R+  ++ ++  FD+ R       HLV   + R+
Sbjct: 1058 EEPLESIQTATVRYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLVAARQLRE 1115


>U39645-5|AAU05591.1|  345|Caenorhabditis elegans Hypothetical
           protein C14F11.4a protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +1

Query: 58  YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 231
           Y P + KK    +RFI   ++R+D + RN   P     R  +  + Q L+ +  Y S+ +
Sbjct: 4   YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60

Query: 232 TRHML 246
             + L
Sbjct: 61  AEYQL 65


>U39645-4|AAU05592.1|  341|Caenorhabditis elegans Hypothetical
           protein C14F11.4b protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +1

Query: 58  YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 231
           Y P + KK    +RFI   ++R+D + RN   P     R  +  + Q L+ +  Y S+ +
Sbjct: 4   YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60

Query: 232 TRHML 246
             + L
Sbjct: 61  AEYQL 65


>Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical
           protein K04G2.10 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 36  QDGYKTCLQADNRQKEDEEIYQASIGSL*QT*EEL 140
           QD  K   + D+RQKE  E Y+  IGS+ +  E++
Sbjct: 238 QDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKM 272


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 25  KETYKMAIRPVYRPTIVKKRTKR-FIRHQSDRYDKLKRNWRKPRGIDNRVRRR 180
           K+ +  A++P +R TI+ +R K   ++   DRY K K+ + K   +    +RR
Sbjct: 387 KKKHMTALKP-WRDTILIERGKMPKLKKIRDRYIKQKKKFNKENRLSKECKRR 438


>AC024763-9|AAU20836.1|  404|Caenorhabditis elegans Hypothetical
           protein Y39A3CL.7b protein.
          Length = 404

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 43  AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRR 177
           A RP  +P   K+R  RF+   S R+++     R P  + +R  R
Sbjct: 295 AERPA-KPNKEKERGDRFLPEPSRRFNRFNHRNRSPPSLSSRTSR 338


>AC024763-8|AAK93863.1|  480|Caenorhabditis elegans Hypothetical
           protein Y39A3CL.7a protein.
          Length = 480

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 43  AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRR 177
           A RP  +P   K+R  RF+   S R+++     R P  + +R  R
Sbjct: 371 AERPA-KPNKEKERGDRFLPEPSRRFNRFNHRNRSPPSLSSRTSR 414


>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
           protein W03A3.2 protein.
          Length = 1540

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 344 RDTVSDLCAVLLFASSDFQLFNI 276
           R  + DLC +LLF S + QL +I
Sbjct: 333 RSQIHDLCKLLLFNSENLQLSDI 355


>AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical
           protein Y67H2A.4a protein.
          Length = 561

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 136 NWRKPRGIDNRVRRRFKGQYLMPNIGYGSNK 228
           N +K + +  RV+RRFKG+ L   I +G  K
Sbjct: 421 NEKKQKHMLKRVKRRFKGENL-KGISFGETK 450


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,097,213
Number of Sequences: 27780
Number of extensions: 160152
Number of successful extensions: 444
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)