Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00483
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 22  TICSLWTACLVLKVTFYVICSLL 90
           T C+L TA +   +  +V+C LL
Sbjct: 405 TFCTLVTALVYCSLAIFVLCELL 427


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 99  RHSQKRANNVKRYFQ--DETGCPQ 34
           RH QKR +  +RYF+  DE   P+
Sbjct: 403 RHKQKRRDERERYFKGLDEEKLPE 426


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +1

Query: 613 EAYGKWSDGTNNDKRLESGYEA 678
           + YG W+D ++ND+     +++
Sbjct: 32  QIYGIWADDSDNDEEERPSFKS 53


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 607  IMEAYGKWSDGTNNDKRLESGYEA 678
            I++A+  W+D  N   +  +GY+A
Sbjct: 1443 IVKAHDSWADFDNQFYKRVTGYKA 1466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,963
Number of Sequences: 336
Number of extensions: 4497
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)