Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00483
         (737 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0208 + 10132435-10132558,10133657-10133904                       32   0.41 
08_02_1550 - 27818271-27818618,27818743-27818955,27819079-278195...    29   2.9  
12_02_0478 + 19514509-19514940,19515749-19515820,19515954-195159...    29   3.9  
06_02_0060 - 11026885-11026929,11027732-11027756,11027886-110279...    29   5.1  
12_02_0991 + 25079293-25079925,25080221-25081116,25081721-25082003     28   6.7  
01_05_0033 + 17390571-17390894,17394152-17394199,17394479-173945...    28   6.7  
02_04_0597 - 24198112-24198462,24199249-24199389,24200322-242005...    28   8.9  

>05_03_0208 + 10132435-10132558,10133657-10133904
          Length = 123

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 173 LCEIRRLYGHSIWSYKGSMECA 238
           LC I RLY HS++ Y+G + CA
Sbjct: 98  LCHITRLYAHSLYLYRGFIICA 119


>08_02_1550 -
           27818271-27818618,27818743-27818955,27819079-27819597,
           27820239-27820357,27820457-27820763,27820840-27820922,
           27821027-27821204,27821328-27821401,27822078-27822293,
           27822724-27822757
          Length = 696

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 619 YGKWSDGTNNDKRLESGYEAVPTRDIH 699
           YG W+  TN +K+L+S Y     ++ H
Sbjct: 476 YGVWASTTNGNKKLDSAYREAKEKEEH 502


>12_02_0478 +
           19514509-19514940,19515749-19515820,19515954-19515986,
           19516169-19516830,19516905-19517045,19518634-19518830,
           19518878-19518965,19518987-19519041,19519501-19519571,
           19519709-19519763,19519881-19519896,19520286-19520361,
           19521202-19521240,19521312-19521333
          Length = 652

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 153 ALNSAGFYARSADYMDIVYGVIKGV-WNVPFITNCIC*RCRCSERL 287
           A NS      +   +D+++G +  V  +VPF+   IC  C CSE+L
Sbjct: 547 ACNSNSHTVPNVQEIDLLHGKLTVVPASVPFLAILICRICSCSEQL 592


>06_02_0060 -
           11026885-11026929,11027732-11027756,11027886-11027992,
           11028023-11028103,11028301-11028405,11031495-11031762,
           11031854-11032056
          Length = 277

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
 Frame = -3

Query: 693 ISSGHSFV-AAFQTFVIIGSIAP--FSVCFHYSDPLITESIRHQGEPINISARH*MFPIL 523
           +++G  FV  AF  F+ +  I P  F++CF     LI  SI     P +  A       L
Sbjct: 100 LATGIFFVFIAFALFLPVMVIMPQKFAICFTLGCGLIIASIFALKGPASQFAHMTSMERL 159

Query: 522 FEVSQYSGCR*RVVHSILFSKSWYISGWVFVMSYVSGLTRWPKSSSL 382
                  GC    ++  +F  S+++S    V+ +   +   P +SSL
Sbjct: 160 PFTGALIGCMVGTIYVSMFLHSYFLSVIFSVLQFFDSMMPIPPTSSL 206


>12_02_0991 + 25079293-25079925,25080221-25081116,25081721-25082003
          Length = 603

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 3   CINSACDYLFSVDSLSRLESNV---LRYLLSSGYDVIAPMLTR 122
           C+ S  DYL +V  +   E NV   +R+L S  Y V +P+L R
Sbjct: 221 CVKSCLDYLEAVPWVGEEEDNVVSSIRHLQSKAYGV-SPLLKR 262


>01_05_0033 +
           17390571-17390894,17394152-17394199,17394479-17394526,
           17395224-17395400,17395492-17395642,17395742-17395828,
           17397236-17397360,17397608-17397726,17399983-17400082,
           17400188-17400223
          Length = 404

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +1

Query: 505 ILANFEEDRKHLM--PCTDVYWFPLMSDRFCDEWIAIMEAYGKW 630
           I  N EE  + +M  P   VY F ++   FC+  +  +E + KW
Sbjct: 163 IRTNTEESFRSIMTEPVPGVYSFAMLQPNFCEMLLQEVENFEKW 206


>02_04_0597 -
           24198112-24198462,24199249-24199389,24200322-24200537,
           24200626-24201561,24201655-24201816,24202026-24202304,
           24202399-24203171,24206142-24207363
          Length = 1359

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 408 TRWPKSSSLLTYMNILSSLRLAQNAMSESCP 316
           T+WP+ S  L  + I+SSLR   +A+   CP
Sbjct: 666 TKWPEQSEELLGL-IVSSLRALDSAVPHGCP 695


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,718,513
Number of Sequences: 37544
Number of extensions: 475701
Number of successful extensions: 1295
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)