Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00483
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical pr... 105 4e-23
Z68882-12|CAA93103.2| 204|Caenorhabditis elegans Hypothetical p... 28 6.0
Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical p... 28 7.9
Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical p... 28 7.9
Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical
protein F52H3.1 protein.
Length = 730
Score = 105 bits (251), Expect = 4e-23
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = +1
Query: 547 CTDVYWFPLMSDRFCDEWIAIMEAYGKWSDGTNNDKRLESGYEAVPTRDIHMSQVGLERH 726
C DVY FPLMS+RFC+E I ME +G+WSDG+NNDKRL GYE VPTRDIHM+QVG ER
Sbjct: 554 CPDVYDFPLMSERFCEELIEEMEGFGRWSDGSNNDKRLAGGYENVPTRDIHMNQVGFERQ 613
Query: 727 W 729
W
Sbjct: 614 W 614
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Frame = +3
Query: 57 ESNVLRYLL--SSGYDV--IAPMLTRPGKAWSNFWGALNSAGFYARSADYMDIVYGVIKG 224
E V++ L+ S YDV IAPM+ +PGK ++NFWGA+ + G+YARS DYM IV G G
Sbjct: 384 EPKVIKDLIQYSKTYDVGIIAPMIGQPGKLFTNFWGAIAANGYYARSEDYMAIVKGNRVG 443
Query: 225 VWNVPFITNCI 257
WNVPFIT+ +
Sbjct: 444 YWNVPFITSAV 454
Score = 61.3 bits (142), Expect = 7e-10
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +2
Query: 323 DSDMAFCASLRELNIFMYVSNEEDFGHLVNPETYDITKT----HPDMYQLFENNMEWTTR 490
D DM+ C R+ F+Y+ NE+ +G L+ + Y T T HP+M+Q+FEN W R
Sbjct: 475 DPDMSMCKFARDNGHFLYIDNEKYYGFLIVSDEYAETVTEGKWHPEMWQIFENRELWEAR 534
Query: 491 YLHPEY 508
Y+HP Y
Sbjct: 535 YIHPGY 540
>Z68882-12|CAA93103.2| 204|Caenorhabditis elegans Hypothetical
protein C47E12.9 protein.
Length = 204
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 514 NFEEDRKHLMPCTDVYWFPLMSDRFC 591
N E+ RK +M D W P+M+ FC
Sbjct: 55 NLEDSRKTVMKAIDQNWAPVMAIPFC 80
>Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical
protein F13H10.4c protein.
Length = 792
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 154 LSTLLDFMRDPQIIWT*Y 207
L ++LD +RDP+I+WT Y
Sbjct: 662 LKSMLDKIRDPKILWTNY 679
>Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical
protein F13H10.4b protein.
Length = 789
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 154 LSTLLDFMRDPQIIWT*Y 207
L ++LD +RDP+I+WT Y
Sbjct: 659 LKSMLDKIRDPKILWTNY 676
>Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical
protein F13H10.4a protein.
Length = 796
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 154 LSTLLDFMRDPQIIWT*Y 207
L ++LD +RDP+I+WT Y
Sbjct: 666 LKSMLDKIRDPKILWTNY 683
>U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical
protein F47B7.2a protein.
Length = 623
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 299 VTYVQEGHDSDMAFC-----ASLRELNIFMYVSNEEDFGHLVNPETYDITKTHPDMYQLF 463
VT V D +M C +S L F Y S+ +D G + + YDI K D+ L
Sbjct: 104 VTVVNCADDKNMPLCREHSVSSYPSLRYFKYNSHNKDDGMKYSGDKYDINKLAHDIAGLA 163
Query: 464 ENNMEWTTRYLHPEYWLT 517
+ + + +PE W T
Sbjct: 164 QAD----AQKQNPESWPT 177
>U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical
protein F47B7.2c protein.
Length = 624
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 299 VTYVQEGHDSDMAFC-----ASLRELNIFMYVSNEEDFGHLVNPETYDITKTHPDMYQLF 463
VT V D +M C +S L F Y S+ +D G + + YDI K D+ L
Sbjct: 104 VTVVNCADDKNMPLCREHSVSSYPSLRYFKYNSHNKDDGMKYSGDKYDINKLAHDIAGLA 163
Query: 464 ENNMEWTTRYLHPEYWLT 517
+ + + +PE W T
Sbjct: 164 QAD----AQKQNPESWPT 177
>U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical
protein F47B7.2b protein.
Length = 678
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 299 VTYVQEGHDSDMAFC-----ASLRELNIFMYVSNEEDFGHLVNPETYDITKTHPDMYQLF 463
VT V D +M C +S L F Y S+ +D G + + YDI K D+ L
Sbjct: 104 VTVVNCADDKNMPLCREHSVSSYPSLRYFKYNSHNKDDGMKYSGDKYDINKLAHDIAGLA 163
Query: 464 ENNMEWTTRYLHPEYWLT 517
+ + + +PE W T
Sbjct: 164 QAD----AQKQNPESWPT 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,512,183
Number of Sequences: 27780
Number of extensions: 408919
Number of successful extensions: 1052
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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