Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00483
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    24   1.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.3  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   3.0  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   5.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.2  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   6.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.1  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 559 YWFPLMSDRFCDEWIA 606
           YW  +   RFCD WIA
Sbjct: 90  YW--VFGPRFCDTWIA 103


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 629 HFPYASIIAIHSSQNL 582
           H PY   IA+HS QN+
Sbjct: 515 HQPYQYKIAVHSEQNV 530


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 466 LEELVHIGMGFCYVICFRINEMAEIL 389
           + E VH+  G  +V    +NE  +I+
Sbjct: 48  MTEKVHVNFGLAFVQLINVNEKNQIM 73


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -1

Query: 668 PLSKRLSLLVPSL-HFPYASIIAIHSS 591
           P S +  + V  L HF Y  +I IHSS
Sbjct: 150 PYSHQTDVWVELLKHFNYMKVIFIHSS 176


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 340 LRESQRAQYIHVCEQRR 390
           +RES   Q++ VC  RR
Sbjct: 334 IRESLDTQFLQVCRSRR 350


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 434 KTHPDMYQLFENNMEWTTRYLH 499
           K+H ++YQ    N  + T+Y H
Sbjct: 37  KSHSNVYQYRCANCTYATKYCH 58


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 359 LNIFMYVSNEEDFGHLVNPETYDITKTHPDMYQLFENNME 478
           L IF+Y   E+        E  D+ +T+P    LF +++E
Sbjct: 150 LPIFLYALGEQPLTEQNLEELRDLKETYPFNPVLFISSLE 189


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 359 LNIFMYVSNEEDFGHLVNPETYDITKTHPDMYQLFENNME 478
           L IF+Y   E+        E  D+ +T+P    LF +++E
Sbjct: 188 LPIFLYALGEQPLTEQNLEELRDLKETYPFNPVLFISSLE 227


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = +2

Query: 311 QEGHDSDMAFCASLRELNIFMYVSNEEDFGHLVNPETYDITKT 439
           +E +D    +  + R+   +MY   +    HL++ E  D   T
Sbjct: 319 EEPNDEVATYDNTPRDFPYYMYSREQYSQSHLISNENRDFQTT 361


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,061
Number of Sequences: 438
Number of extensions: 4868
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)