Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00482
         (323 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0070 + 27479654-27479672,27479864-27479922,27480339-274803...   113   3e-26
01_06_0260 - 27959188-27959251,27959342-27959424,27960220-279603...   112   7e-26
07_01_0385 - 2871628-2872131                                           28   1.9  
12_02_0648 + 21490202-21490296,21490547-21490634,21491216-214912...    27   2.6  
09_06_0303 - 22149214-22149474,22150099-22150236,22150856-221511...    26   7.8  
07_03_0039 - 12718972-12720699                                         26   7.8  
03_01_0396 + 3079840-3079946,3080503-3080737,3080826-3080933,308...    26   7.8  

>05_07_0070 +
           27479654-27479672,27479864-27479922,27480339-27480378,
           27480477-27480565,27481065-27481147,27481219-27481282
          Length = 117

 Score =  113 bits (272), Expect = 3e-26
 Identities = 48/70 (68%), Positives = 56/70 (80%)
 Frame = +1

Query: 13  KMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKR 192
           ++ KRTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR  VGIW CK 
Sbjct: 25  ELTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKD 84

Query: 193 CKRTVAGGAW 222
           C +  AGGA+
Sbjct: 85  CGKVKAGGAY 94


>01_06_0260 -
           27959188-27959251,27959342-27959424,27960220-27960308,
           27960388-27960427,27960938-27960981,27961240-27961288
          Length = 122

 Score =  112 bits (269), Expect = 7e-26
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = +1

Query: 22  KRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKR 201
           KRTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR  VGIW CK C +
Sbjct: 33  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGK 92

Query: 202 TVAGGAW 222
             AGGA+
Sbjct: 93  VKAGGAY 99


>07_01_0385 - 2871628-2872131
          Length = 167

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 124 YTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAW 222
           + C FC K   K   +G       K  VAGG+W
Sbjct: 47  FPCLFCAKTFRKSQALGGHQNAHRKERVAGGSW 79


>12_02_0648 +
           21490202-21490296,21490547-21490634,21491216-21491260,
           21491355-21491387,21491480-21491557,21491647-21491690,
           21491765-21491805,21492102-21492184,21492261-21492352,
           21492468-21492537,21492838-21492876,21493670-21493687,
           21494586-21494713,21495235-21495358,21495585-21495716,
           21496092-21496223,21496582-21496665
          Length = 441

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 103 EVTQHAKYTCSFCGKDAM 156
           E+ +H KYTC  C K A+
Sbjct: 194 EMVEHNKYTCPICSKTAL 211


>09_06_0303 -
           22149214-22149474,22150099-22150236,22150856-22151100,
           22151344-22151809
          Length = 369

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
 Frame = +1

Query: 4   RFTKMAKRTKKVG-ITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIW 180
           RF       ++V     K G  Y   L K          AKYT    G  A  RS  G  
Sbjct: 66  RFEAFKANARQVNEFNKKEGMSYTLGLNKFSDMSYEEFAAKYTGGMPGSIADDRSSAGAV 125

Query: 181 SCKRCKRTV 207
           SCK  ++ V
Sbjct: 126 SCKLREKNV 134


>07_03_0039 - 12718972-12720699
          Length = 575

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -1

Query: 230 ENTQAPPATVLLHRLQDQMPTQERFIASLPQNEQVYFACWVTSIFLTILRR 78
           EN  A     +LH  +D +  QERF   L +  +    C + S+F  IL +
Sbjct: 416 ENKIATKIIAVLHSNRDTL--QERFDCLLERGLEYKMLCQIVSVFPKILNQ 464


>03_01_0396 +
           3079840-3079946,3080503-3080737,3080826-3080933,
           3081009-3081178,3081607-3081740,3081856-3082027,
           3082160-3082712,3082836-3082948,3083051-3083294,
           3083434-3083652
          Length = 684

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -1

Query: 257 RLHDEAAVVENTQAPPATVLLHRLQDQMPTQERFIASLPQN 135
           RLH    ++  +  PP++ L+  L D++P  +  +  L  N
Sbjct: 367 RLHAAREMLRMSPPPPSSFLVFSLYDELPKGDFVLEQLANN 407


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,387,392
Number of Sequences: 37544
Number of extensions: 161517
Number of successful extensions: 399
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)