Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00476X
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   1.8  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   5.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   5.6  
AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin preprop...    23   7.4  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    23   7.4  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2

Query: 542 SSPFDAQAFSWKLFLRW 492
           SS  D   FSWKLF  W
Sbjct: 272 SSKDDEYVFSWKLFTGW 288


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 326 ASHRPHSGKSRALPTQTYIPCSRS 397
           A+ RPH  K + L  Q   PC +S
Sbjct: 112 AAKRPHMKKKKVLFHQDNAPCHKS 135


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
 Frame = +3

Query: 117 PSCCSLPQKRD*KERVYSIPSLQRRRWSLCSSKAVWHNTGSLAQEIAEFLLQLLRNAESN 296
           PS   L   R     VYS+    RRRWSLC  K  + +     Q        LL    S 
Sbjct: 9   PSGARLSISRGSPTGVYSV----RRRWSLC-QKLHFRDQVCCVQRSPPHWPYLL--CSSC 61

Query: 297 ADNKTLDVDRLVIDHIQVNRAPCLR-RRTYRA 389
           +    L + +L +DH +  +A  L+  R +RA
Sbjct: 62  SAMPALKILQLNVDHCREGQALALQAAREHRA 93


>AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin
           preproprotein protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 16/71 (22%), Positives = 29/71 (40%)
 Frame = +3

Query: 198 SLCSSKAVWHNTGSLAQEIAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRR 377
           SL +  A ++   + AQ I   +L    + +    + T D     I+H+Q          
Sbjct: 11  SLAAYAAYYYVHIAEAQPIGSLVLAAPHSQQQQPGSSTSD--EATINHLQQQHQRLKDTN 68

Query: 378 TYRAHGRINPY 410
            YRA  ++ P+
Sbjct: 69  VYRARSKMRPH 79


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 332 HRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHRSMSQ 445
           HR  +G+S   P+   +  ++ HQ +    L +R +S+
Sbjct: 195 HRQEAGQSLKGPSNNMLQANKPHQQVDEHELKNRIISK 232


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,873
Number of Sequences: 2352
Number of extensions: 13150
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)