Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00474
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    26   0.30 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    26   0.30 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.7  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +1

Query: 478 GSVRSVRRLPDFLVTSNGTVTDDFDLYGKSW 570
           G+++++ ++   LVT++  V D F ++G  W
Sbjct: 215 GTIKTLVQMHSNLVTTSEEVCDSFSIFGLVW 245


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +1

Query: 478 GSVRSVRRLPDFLVTSNGTVTDDFDLYGKSW 570
           G+++++ ++   LVT++  V D F ++G  W
Sbjct: 215 GTIKTLVQMHSNLVTTSEEVCDSFSIFGLVW 245


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 51  TGVGTPAKYTTFEGDDLPFLGNCTYLASRDRNQTGEHKYQV 173
           +G GTP KYT  E   + F   C +L   +     +++ QV
Sbjct: 782 SGGGTPGKYTA-EAGFMSFYEICDFLHEDNTTLVWDNEQQV 821


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 115 LPKKGRSSPSKVVYLAGVPTPVHVQSK 35
           LP +GR +    V++ G P P H++ K
Sbjct: 36  LPGQGRVNQLGGVFINGRPLPNHIRLK 62


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/54 (25%), Positives = 20/54 (37%)
 Frame = +1

Query: 298  DREDRGVQVPG*GELGHHQLAQRTGCLRHSAGYTRGADSVATEPGIRRPRADLP 459
            D   +  ++    E   H L + T        YT G D V T P   +   D+P
Sbjct: 1148 DENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDGVRTTPIHCQTEQDVP 1201


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 314 VFKYPVKENWGTISLLNGQDVSVTLPD 394
           ++K  V  N G ++LLN +DV + L D
Sbjct: 69  IYKLDVCGNGG-VNLLNPEDVELVLTD 94


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 550 DLYGKSWQASPEKLTELE 603
           ++Y   W A+PE +T LE
Sbjct: 380 EVYIPCWNATPEIITYLE 397


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 396 ISGRVTETSCPLSKLMVP 343
           I GR+T+ SC   + + P
Sbjct: 776 IPGRITQKSCSTKRYVTP 793


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 344 GTISLLNGQDVSVTLPD 394
           G ++LLN +DV + L D
Sbjct: 78  GGVNLLNPEDVELVLTD 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,367
Number of Sequences: 336
Number of extensions: 3622
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)