Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00474
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 33 0.17
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF016682-6|AAL06054.1| 284|Caenorhabditis elegans Hypothetical ... 30 1.6
AL033508-1|CAA22058.2| 821|Caenorhabditis elegans Hypothetical ... 29 2.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 3.7
U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical pr... 28 4.9
AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin... 28 4.9
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensor... 27 8.6
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 8.6
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 8.6
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 76 TLPLRATTFPSWATVPTSPPETET 147
T+P+ T PS ATVPT+PP T T
Sbjct: 579 TVPVTTTVVPSSATVPTTPPTTVT 602
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 76 TLPLRATTFPSWATVPTSPPETET 147
T+P+ T PS ATVPT+PP T T
Sbjct: 635 TVPVTTTVVPSSATVPTTPPTTVT 658
>AF016682-6|AAL06054.1| 284|Caenorhabditis elegans Hypothetical
protein T07D3.3 protein.
Length = 284
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +1
Query: 4 RETSACCQRTAWTARVQESVHQLSTLPLRATTFPSWATVPTSPPETETKLENINIRCTLR 183
R ++ C++ + QE +Q LP A F T+ PP ++ + N+ ++R
Sbjct: 56 RAEASICEKIV--SSQQERHNQYGDLP-NAGHFGHLHTMFVIPPSSDEHTDYYNVSGSIR 112
Query: 184 TARAMITLILCALRLCISYTRRM 252
+ + M + LCA++ +RM
Sbjct: 113 SGKLMEIICLCAMKAKSQGVKRM 135
>AL033508-1|CAA22058.2| 821|Caenorhabditis elegans Hypothetical
protein Y106G6G.2 protein.
Length = 821
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -2
Query: 232 CTILVHTILALSSHGPFVAYT*YLCSPVWFLSLEAR*VQLPKKGRSSPSKVVYLAGVPTP 53
C +L + L + SH PFV P+ L L +P+KG SS SKV G P
Sbjct: 216 CALLTTSNLKILSHQPFVNLLWEKVCPLIILLLG-----IPQKGMSSSSKVSESGGNEEP 270
Query: 52 V 50
V
Sbjct: 271 V 271
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 7 ETSACCQRTAWTARVQESVHQLSTLPLRATTFPSWATVPTSPPETETKLENINIRCT 177
E+++ T T V +V +T+P +T + + TS P T T +E+ + T
Sbjct: 272 ESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFT 328
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 7 ETSACCQRTAWTARVQESVHQLSTLPLRATTFPSWATVPTSPPETETKLENINIRCT 177
E+++ T T V +V +T+P +T + + TS P T T +E+ + T
Sbjct: 272 ESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFT 328
>U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical
protein T02G5.11 protein.
Length = 184
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Frame = +1
Query: 496 RRLPDFLVTSN-----GTVTDDFDLYGK 564
RRLP FL T+N V DF+LYGK
Sbjct: 18 RRLPTFLSTNNSGFFDSVVASDFNLYGK 45
>AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin
protein 73 protein.
Length = 577
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 233 SHIREEC--FHISKDPTTKKLRTVIGKTAVFKYPVKENWGTISLLNGQ 370
SH + + FH D + + +GK +KY V W LNGQ
Sbjct: 372 SHFKGQAPEFHPMVDSQSLPIWCKLGKVVKYKYKVTPGWTDFRRLNGQ 419
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
ZC84.1 protein.
Length = 1556
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 501 PAHTPHRPSVRFPYRKVGTRTANSRFSCDTVSSTCISG 388
PA TP RPS P ++ R A++ C ++ C +G
Sbjct: 1057 PAPTPQRPSDGCPNAQIAFRDADAVRVCSAGAANCPAG 1094
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 66 PAKYTTFEGDDLPFLGNCTYLASRDRNQTGEHKYQVYATNGPCD 197
PA YT + ++ P + N +GEH Y Y +G D
Sbjct: 29 PASYTETDREETPMQNRTEDDTNSYGNSSGEHDYDSYLDSGDDD 72
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 66 PAKYTTFEGDDLPFLGNCTYLASRDRNQTGEHKYQVYATNGPCD 197
PA YT + ++ P + N +GEH Y Y +G D
Sbjct: 29 PASYTETDREETPMQNRTEDDTNSYGNSSGEHDYDSYLDSGDDD 72
>AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform j protein.
Length = 255
Score = 27.5 bits (58), Expect = 8.6
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Frame = +2
Query: 233 SHIREECFHISKDPTTKKL---RTVIGKTAVFKYPVKENWGTISLLNGQDVSVTLPDIHV 403
+H R C P ++L RTV T+ V E T+ + + VTLP +
Sbjct: 90 AHCRNRCVKQPNKPEVQELKHRRTVTSTTSTPFQTVNEE-STVEPSATKRLPVTLPVKKL 148
Query: 404 ELTVSQLNLEFAVRVPTFLYGNRTEGLCGVCAGYQISSSPATELSPMTSTCTARAGKRLP 583
EL S LYG +G CG G++ +L+ + R
Sbjct: 149 ELVQSGHGNGLCQDCDP-LYGTCLDGKCGCMKGFRSLGKVCIDLNECDNGAVCGPNARCV 207
Query: 584 RS*RSWRC 607
S++C
Sbjct: 208 NEIGSFQC 215
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.5 bits (58), Expect = 8.6
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Frame = +2
Query: 233 SHIREECFHISKDPTTKKL---RTVIGKTAVFKYPVKENWGTISLLNGQDVSVTLPDIHV 403
+H R C P ++L RTV T+ V E T+ + + VTLP +
Sbjct: 90 AHCRNRCVKQPNKPEVQELKHRRTVTSTTSTPFQTVNEE-STVEPSATKRLPVTLPVKKL 148
Query: 404 ELTVSQLNLEFAVRVPTFLYGNRTEGLCGVCAGYQISSSPATELSPMTSTCTARAGKRLP 583
EL S LYG +G CG G++ +L+ + R
Sbjct: 149 ELVQSGHGNGLCQDCDP-LYGTCLDGKCGCMKGFRSLGKVCIDLNECDNGAVCGPNARCV 207
Query: 584 RS*RSWRC 607
S++C
Sbjct: 208 NEIGSFQC 215
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 349 HQLAQRTGCLRHSAGYTRG 405
H +AQ T C+R GY+RG
Sbjct: 138 HPVAQSTDCIRGKMGYSRG 156
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 9 DQCVLPADCL--DCTCTGVGTPAKYTTFEGD 95
++CV ADC+ C CTG T K +GD
Sbjct: 1260 EECVEGADCVQNSCKCTGNKTELKGECVDGD 1290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,550,386
Number of Sequences: 27780
Number of extensions: 362316
Number of successful extensions: 1280
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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