Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00469
(560 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 107 1e-24
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 106 2e-24
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 90 2e-19
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 54 2e-08
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 48 7e-07
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 34 0.016
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.050
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.088
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.27
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.47
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 1.4
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 1.9
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 1.9
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 2.5
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 2.5
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 27 2.5
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 27 2.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.5
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.3
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.3
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.3
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 3.3
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 3.3
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.3
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 4.4
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 26 4.4
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 4.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 5.8
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 5.8
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 25 5.8
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 5.8
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 7.6
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 7.6
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 7.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 107 bits (257), Expect = 1e-24
Identities = 50/104 (48%), Positives = 71/104 (68%)
Frame = +2
Query: 8 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 187
KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK
Sbjct: 498 KITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLK 557
Query: 188 EKISDSDKQTILDKCNDTIKWLVPTNWPTRRSMSTSRKNWKAFA 319
+K+ SDK+T+ +TI+WL + +K ++ A
Sbjct: 558 DKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVA 601
Score = 42.7 bits (96), Expect = 4e-05
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +1
Query: 256 SNQLADKEEYEHKQKELEGICNPIITKMYQ 345
SN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 581 SNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 106 bits (255), Expect = 2e-24
Identities = 48/82 (58%), Positives = 65/82 (79%)
Frame = +2
Query: 8 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 187
KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK
Sbjct: 498 KITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLK 557
Query: 188 EKISDSDKQTILDKCNDTIKWL 253
+K+ SDK+ I +TI+WL
Sbjct: 558 DKVDASDKEAIDKAVKETIEWL 579
Score = 45.6 bits (103), Expect = 5e-06
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 259 NQLADKEEYEHKQKELEGICNPIITKMYQ 345
N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 582 NTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 90.2 bits (214), Expect = 2e-19
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKL 184
K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L
Sbjct: 528 KLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQL 587
Query: 185 KEKISDSDKQTILDKCNDTIKWL 253
K+ DKQ +LD D +WL
Sbjct: 588 GGKVDPEDKQAVLDAVEDVAEWL 610
Score = 29.1 bits (62), Expect = 0.47
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 268 ADKEEYEHKQKELEGICNPIITKMY 342
A KEE+E ++++L+ + +PI K+Y
Sbjct: 617 ASKEEFEDQRQKLDAVVHPITQKLY 641
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 53.6 bits (123), Expect = 2e-08
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +2
Query: 11 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 190
I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + +
Sbjct: 504 IEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMM 563
Query: 191 KISDSDKQTI---LDKCNDTIKWLVPTNWPTRR--SMSTSRKNWKAFA 319
K+ DK I L +C ++ L TN R + R KAFA
Sbjct: 564 KLKRGDKSKIEAQLAECMSQLE-LEDTNTDALRKAELRLKRTVQKAFA 610
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 48.4 bits (110), Expect = 7e-07
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = +2
Query: 2 ENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 181
++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++
Sbjct: 539 DSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH- 596
Query: 182 LKEKISDSDKQTILDKCNDTIKWLVPTN 265
K+K+ + + K D + + N
Sbjct: 597 -KDKLDQQAVEDLRSKITDLRETVAKVN 623
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 33.9 bits (74), Expect = 0.016
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +2
Query: 11 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EK 181
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAP 600
Query: 182 LKEKISDSDKQTILDKCNDTIKWLVPTNWPTRRSMSTSR 298
+ S + +L K D WL T +++ T++
Sbjct: 601 FTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAK 636
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.050
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 47 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 226
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 227 K 229
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.088
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 29 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 208
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 209 KQTILDKCNDTIK 247
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.27
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 41 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 208
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.47
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 29 KGRLSKEEIERMVNEAEKYRNEDD 100
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.5 bits (58), Expect = 1.4
Identities = 18/88 (20%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 47 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 223
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 224 DKCNDTIKWLVPTNWPTRRSMSTSRKNW 307
+ + + + +++T RK W
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRKLW 577
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 1.9
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +2
Query: 11 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 190
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 191 KISDSDKQTILDKCNDTIK 247
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 62 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 166
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +2
Query: 2 ENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 181
+ K T D SKEE+E +V E E D +Q + K+ L++ F ++ K
Sbjct: 531 KGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNRK 581
Query: 182 LKEKISD 202
LK+K S+
Sbjct: 582 LKKKASN 588
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 2.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 92 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 253
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 392 HPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHLVP 511
H +P +L+PPS R++KP H+ P+ + L P
Sbjct: 169 HLRSSMPLVMANSLSPPSSRALKP-IHSLSNPSTASSLEP 207
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 2.5
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 44 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK--LKEKISDSDKQT 217
+E E AE+ N + ++E Q K A+E + + E E+ + EK+ + ++
Sbjct: 791 REAEEEAARAAEEEANRELHEQEEAQ-KRAIEERTRAAREAKEREQREMAEKL-ERQRRI 848
Query: 218 ILDKCNDTIKWLVPTNWPTRRSMSTSRKNWKAFAIR**RRCTRVPEESPEVCRA--SRAE 391
++ + + L R ++ S + A+ R V +SP R SR
Sbjct: 849 QQERDEEISRKLAEKAAARRANIGASSPSPGAWR-RGGASAGGVSRDSPRYSRGGYSRGS 907
Query: 392 HPEPEVPPPGLEALAPPSRRS 454
P E P A PPSRR+
Sbjct: 908 VPPRETLAPSKGAYVPPSRRN 928
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 2.5
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 172
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 3.3
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +2
Query: 44 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 196
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 197 SDSDKQTILDKCND 238
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 47 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 217
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 3.3
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 199
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 200 DSDKQT 217
+D+ T
Sbjct: 695 -TDRLT 699
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 3.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 11 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 187
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 188 EKISDSDKQTILDKC 232
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 3.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 353 EESPEVCRASRAEHPEPE 406
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.3
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 41 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 163
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 29 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 139
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 116 IQAKNA-LESYCFSMKS---TMEDEKLKEKISDSDKQTILDKCNDTIKWLVPTNW 268
+QA+ A LESY ++ T+ + K+++++SD KQ + I + T W
Sbjct: 114 LQARKANLESYRAKLEKEYKTLAENKIQQRLSDGTKQLVTIDGLQYITGVSDTKW 168
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +2
Query: 44 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 223
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 224 D 226
D
Sbjct: 451 D 451
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 5.8
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +2
Query: 44 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 223
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 224 DKC 232
D C
Sbjct: 754 DGC 756
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 5.8
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 181
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 182 LKEKISDSDK 211
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 364 RGLLRHPGTSSLLSDCKCLPILSA-CAH 284
R ++ H GT + D CLP SA C H
Sbjct: 122 REVVHHEGTCEICYDEGCLPFFSAECDH 149
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 5.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 125 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 250
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 7.6
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +2
Query: 29 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 199
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 200 DSDKQ--TILDK 229
D D++ T+ DK
Sbjct: 281 DKDQEQDTVSDK 292
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 7.6
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 38 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 208
++K + + +AEK R ED+++K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 7.6
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Frame = +2
Query: 26 DKGRLSKEEIERMVNEAEKYR-NEDD--------KQKETIQAKNALESYCFSMKSTMED- 175
+ G K+ +R V +EK EDD K +T++A N S K +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 176 ---EKLKEKISDSDKQTILDKCND 238
EK++EK+++ DK ++ D D
Sbjct: 787 ENIEKIEEKLTEVDKVSLSDAFPD 810
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,162,188
Number of Sequences: 5004
Number of extensions: 42537
Number of successful extensions: 208
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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