Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00468
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1257 - 25241194-25242018 30 2.0
07_03_0861 + 22072041-22072789,22074065-22074164 30 2.0
06_03_1220 - 28505306-28508497 29 2.7
05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033 29 2.7
06_03_1219 - 28491185-28494415 29 4.7
04_04_0878 + 29039110-29039366,29039634-29039822,29039907-290400... 29 4.7
03_06_0297 - 32924162-32924605 29 4.7
08_02_0610 + 19307537-19308011,19308187-19310846 28 6.2
03_02_0693 - 10441253-10441294,10441404-10441511,10441594-104416... 28 6.2
01_01_1055 + 8342761-8342822,8343374-8343791,8343867-8344096,834... 28 6.2
12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192 28 8.3
10_08_0892 - 21347588-21348346 28 8.3
10_08_0824 + 20821724-20822137,20822457-20822543,20822729-208228... 28 8.3
09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040 28 8.3
06_03_1217 - 28484007-28487237 28 8.3
05_07_0056 + 27382708-27383871,27384450-27384818 28 8.3
03_03_0156 + 14939355-14939435,14939559-14939624,14940331-149404... 28 8.3
03_02_0735 + 10811326-10812342,10813199-10813555,10813962-108142... 28 8.3
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 28 8.3
>07_03_1257 - 25241194-25242018
Length = 274
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -3
Query: 497 ITTRPVRTSLRASVVRPRSTAA----CPCDSRAKTGRSDRTGSPRRRAATVPPA 348
+TT TS VVRPR A P S A++ T RRRA PP+
Sbjct: 158 VTTGSRGTSTTTPVVRPRLRARLPELAPAASPARSSPPKPTAKTRRRATRTPPS 211
>07_03_0861 + 22072041-22072789,22074065-22074164
Length = 282
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 460 LARRLVRTGLVVIDSSKSQEPWHSVKPVMGNLLTHKPW 573
+AR + +V+ S E WHS + V +LLT PW
Sbjct: 59 VARANYESKVVIFVFSSLTEEWHSSRSVSWSLLTADPW 96
>06_03_1220 - 28505306-28508497
Length = 1063
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/102 (26%), Positives = 39/102 (38%)
Frame = -2
Query: 696 PTLSILPAVRSATRNRKPSVNASLRASRAQTL*V*SASDGSPRLVRQQVPHHRLHGVPRL 517
P ++++ + PSV A +L V D S L+ Q P PRL
Sbjct: 119 PNVTVVDVSYNCLSGELPSVATGAAARGGLSLEV---LDVSSNLLAGQFPSAIWEHTPRL 175
Query: 516 LRLGTIYNNQTGTHESACECCQAAKYSGVSVRLTCEDGTVRP 391
+ L N+ GT S C C A +SV + G + P
Sbjct: 176 VSLNASNNSFHGTIPSLCVSCPALAVLDLSVNVL--SGVISP 215
>05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033
Length = 143
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 328 P*TWSRILLWYQEPSTAGAGQGVRDPD 248
P TWS+ W++ T+GAG+G +PD
Sbjct: 70 PVTWSKEKTWWKSLGTSGAGKG-HEPD 95
>06_03_1219 - 28491185-28494415
Length = 1076
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -2
Query: 582 DGSPRLVRQQVPHHRLHGVPRLLRLGTIYNNQTGTHESACECCQAAKYSGVSVRL 418
D S L+ Q P PRL+ L N+ GT S C C A +SV +
Sbjct: 158 DVSSNLLAGQFPSAIWEHTPRLVSLNASNNSFRGTIPSLCVSCPALAVLDLSVNM 212
>04_04_0878 +
29039110-29039366,29039634-29039822,29039907-29040044,
29040786-29041011,29041686-29041878,29041963-29042123
Length = 387
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2
Query: 363 HCAACGPGLTKHPKPGHASYSG 298
HC ACG GL KHP+ G SG
Sbjct: 358 HCYACGDGL-KHPEDGTLYESG 378
>03_06_0297 - 32924162-32924605
Length = 147
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 329 CLVSPGPQAAQWQRAGVATRCGRTVPSSHVSRTDTPL 439
CL P AA +RA V RCG T P + V TD L
Sbjct: 23 CLHRPQVGAAAARRAAVGVRCGGT-PPAEVPGTDRSL 58
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 449 PRSTAACPCDSRAKTGRSDRTGSPRRR 369
P +T A PC ++ R+D G RRR
Sbjct: 948 PTTTTANPCTCTSRASRTDTAGGARRR 974
>03_02_0693 -
10441253-10441294,10441404-10441511,10441594-10441677,
10441765-10443062,10443111-10444804,10444890-10444957,
10445057-10445186,10445292-10445415,10445551-10445711,
10446714-10446868
Length = 1287
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = -3
Query: 593 DPHPMGAHGLCVNKFPITGFTECHGSCDLELSITTRPVRTSLRASVVRP 447
D + +G G C+ ++ F + +C L + R LRA +RP
Sbjct: 146 DKYDIGGEGACLKRYTDPSFFKTDSACSSMLEQGIQRERRPLRAMEIRP 194
>01_01_1055 +
8342761-8342822,8343374-8343791,8343867-8344096,
8344136-8344324,8344458-8344555,8344588-8344742
Length = 383
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 4/103 (3%)
Frame = -2
Query: 525 PRLLRLGTIYNNQ--TGTHESACECCQAAKYSGVSVRLTCED--GTVRPHRVATPARCHC 358
PR+ R G +N++ GT ++ E S V R T V+PHR+ P R
Sbjct: 3 PRVRRFGARHNDERRNGTSKTVPELSTVGSKSTVG-RCTALQRVALVKPHRITHPMRAKL 61
Query: 357 AACGPGLTKHPKPGHASYSGTKNPVQPERDREYVTRIYSSASG 229
A P P+P ++ + P R R + G
Sbjct: 62 AVPVPS-PAPPRPPSVTFRCLRPRTPPTRAPATPARALGNGGG 103
>12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192
Length = 283
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 320 GLGCLVSPGPQAAQWQRAGVAT---RCGRTVPS 409
G GC + P P+ R+GVA R GRTV S
Sbjct: 114 GAGCAIRPRPRCGPRARSGVAAQQWRHGRTVAS 146
>10_08_0892 - 21347588-21348346
Length = 252
Score = 27.9 bits (59), Expect = 8.3
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Frame = -3
Query: 545 ITGFTECHGSCDLELSITTRPVRTSLRASV-VRPRSTAACPCDSRAKTGRSDR----TGS 381
+ G S L+ RPV SV V + A PCD+ A GRS R G
Sbjct: 104 VVGEAAARSSSSSHLAARARPVPAPWLGSVGVVAAADALVPCDADAAEGRSKRPREVVGE 163
Query: 380 PRRRA-ATVPPADPDSLSTLNLVT 312
RRA A+ A P L+T
Sbjct: 164 DGRRACASQGSAAPGRRGESTLLT 187
>10_08_0824 +
20821724-20822137,20822457-20822543,20822729-20822829,
20822917-20822967,20823616-20823790,20823878-20824192,
20824504-20824707,20824799-20825314,20825400-20825609,
20826092-20826280,20827254-20827405,20827685-20827837,
20827925-20828006,20828086-20828475
Length = 1012
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1
Query: 334 SESGSAGGTVAARRRGDPVRSDRPVFARESHGHAAVLRGLTTLARRLVRTGLVVIDSSKS 513
+ S + GG A+RRR P S RP SH A+L L T + +V L + D K+
Sbjct: 27 ASSSAGGGGAASRRRRRPGLSCRP-----SHLFFALLVALFTASLLVVWQLLPIGDGGKA 81
Query: 514 QE 519
+E
Sbjct: 82 EE 83
>09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040
Length = 339
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = -3
Query: 509 LELSITTRPVRTSLRASVVRPRSTAACPC--DSRAKTG---RSDRTGSPRRRAATVPP 351
L+ + T+ + S + +VVR R C D + G R+ RTG PR AA P
Sbjct: 224 LKSPMLTQVLECSFKLAVVRERLPTLCSIHGDEAGQPGLRRRAHRTGEPRAAAAACQP 281
>06_03_1217 - 28484007-28487237
Length = 1076
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/102 (25%), Positives = 39/102 (38%)
Frame = -2
Query: 696 PTLSILPAVRSATRNRKPSVNASLRASRAQTL*V*SASDGSPRLVRQQVPHHRLHGVPRL 517
P ++++ + PSV A +L V D S L+ Q P PRL
Sbjct: 127 PNVTVVDVSYNCLSGELPSVATGAAARGGLSLEV---LDVSSNLLAGQFPSAIWEHTPRL 183
Query: 516 LRLGTIYNNQTGTHESACECCQAAKYSGVSVRLTCEDGTVRP 391
+ L N+ G+ S C C A +SV + G + P
Sbjct: 184 VSLNASNNSFHGSIPSLCVSCPALAVLDLSVNVL--SGVISP 223
>05_07_0056 + 27382708-27383871,27384450-27384818
Length = 510
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 62 KKYFEHFYIIKCINIL 109
KKYF+H +I+K +N+L
Sbjct: 203 KKYFDHSFIVKLLNLL 218
>03_03_0156 +
14939355-14939435,14939559-14939624,14940331-14940414,
14940796-14940875,14941313-14941358,14941456-14941566,
14942224-14942290,14942615-14942630,14942871-14942931,
14943015-14943145,14943243-14943360,14944053-14944176,
14944517-14944618,14944717-14944785,14946250-14946329
Length = 411
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
Frame = -2
Query: 591 SASDGSPRLVRQQVPHHRLHGVPRLLRLGTIYNNQTGTHESACECCQAAKYSGVSVRLTC 412
+ DG ++R +V RL V L R N + G S C C + S S +
Sbjct: 6 AGGDGEAAVMRAEVAALRLR-VQELER----ENQRLGKIASRCTCGSSKDDSAASSPVVS 60
Query: 411 EDGTVRPHRVATPARCHCAACGPGLTKH-PK 322
E + + HC C G+ H PK
Sbjct: 61 ESLSSSKQEPQKNVKSHCRGCQVGVVSHCPK 91
>03_02_0735 +
10811326-10812342,10813199-10813555,10813962-10814225,
10814894-10815010,10815796-10815944,10816315-10816606,
10816681-10816845,10817106-10817357
Length = 870
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/88 (22%), Positives = 32/88 (36%)
Frame = -2
Query: 534 HGVPRLLRLGTIYNNQTGTHESACECCQAAKYSGVSVRLTCEDGTVRPHRVATPARCHCA 355
H PRL + + + + A A+ ++ + T PH +TP + A
Sbjct: 109 HSKPRLPSIRSCFRGKKNKERKANAAAVVARRQALTPAPSLV--THPPHSPSTPEKTQAA 166
Query: 354 ACGPGLTKHPKPGHASYSGTKNPVQPER 271
P T+ P P T +P P R
Sbjct: 167 T--PSATQPPSPAVTEDGRTNSPATPNR 192
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = -3
Query: 422 DSRAKTGRSDRTGSPRRRAATVPPADPDSLSTLNLVTHPTLVPRTQYSRSGTGST*PG 249
D + R R SPRR T + P L + +HP PR + + G PG
Sbjct: 31 DWHRRLARKRRLFSPRRLLPTSLRSSPRRLPSPPQASHPPPAPRLSSAATAAGVAAPG 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,793,944
Number of Sequences: 37544
Number of extensions: 460105
Number of successful extensions: 1767
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1765
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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