Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00468
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055) 31 1.2
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 29 4.8
SB_32997| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_30851| Best HMM Match : C2 (HMM E-Value=0.0042) 29 4.8
SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43) 29 4.8
SB_7096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_45429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_37947| Best HMM Match : SAP (HMM E-Value=8e-07) 28 6.4
SB_50424| Best HMM Match : DUF581 (HMM E-Value=5.1) 28 8.4
SB_20247| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) 28 8.4
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 28 8.4
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_33912| Best HMM Match : Transposase_27 (HMM E-Value=3.6) 28 8.4
SB_33643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 32.3 bits (70), Expect = 0.39
Identities = 34/101 (33%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Frame = -2
Query: 531 GVPRLLRLGTIY---NNQTGTHESACECCQAAKYSGVSVRLTCEDGTVRPHRVATPARCH 361
G P+L LG + + E+ C+ C+A Y RL C T+ P PA
Sbjct: 3060 GFPKLCDLGHFALTKDKPRASVEANCQICRAGTYGNHPERLNC---TICPPGYFCPA--- 3113
Query: 360 CAACGPGLTKHPKP-GH--ASYSGTKNPVQPER--DREYVT 253
GP K+P P GH SG KNP P DRE T
Sbjct: 3114 -GTIGP--HKNPCPLGHFCPEGSGDKNPCSPGHYGDRELAT 3151
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 435 GVSVRLTCEDGTVRPHRVATPARCHCAACGPG 340
G + L+CE G+ +P+R + +C CGPG
Sbjct: 2530 GTNAPLSCEPGSYQPNR----GQGNCTKCGPG 2557
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 498 YNNQTGTHE-SACECCQAAKYSG 433
+NNQTG SACE C KY G
Sbjct: 617 FNNQTGQQAFSACEPCLPGKYCG 639
>SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055)
Length = 685
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 426 RTRRCTSRPDNTRTQTRAYRSGC 494
+TR+CT R NTR++T+ Y+ C
Sbjct: 448 KTRKCTYRQANTRSRTQTYKYTC 470
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 404 GRSDRTGSPRRRAATVPPADPDSLSTLNLVTHP 306
G +D GSP +++T PP P SLST++ P
Sbjct: 807 GSNDFIGSPTAKSST-PPVPPASLSTISTTPQP 838
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = -3
Query: 500 SITTRPVRTSLRASVVRPRSTAACPCDSRAKTGRSDRTGSPRRRAATVPPADPDSLSTLN 321
S +T T+L S + +T + + + T SP T PP +S ST
Sbjct: 474 STSTTKATTTLSTSTTKATTTPSTSTTKATTSTAVEATTSPAA-TETAPPTTTESRSTNK 532
Query: 320 LVTHPTLV 297
T PT++
Sbjct: 533 ATTIPTII 540
>SB_32997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 415 RESHGHAAVLRGLTTLARRLVRTGLVVIDSSKSQEPWHSVKPVMGNLLTHKPW 573
++ H A + LT A V T + + +Q P S+KP+ L+T PW
Sbjct: 105 KQRGNHVAKAKDLTREANEAVTTFNQAMSAIAAQTPTQSIKPLESQLVT--PW 155
>SB_30851| Best HMM Match : C2 (HMM E-Value=0.0042)
Length = 889
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 351 CGPGLTKHPKPGHASYSGTKNPVQP 277
C PG K KPG ++ GT P+ P
Sbjct: 650 CAPGGRKLGKPGRSASMGTPRPIDP 674
>SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43)
Length = 1602
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 697 ADIVNTTCCQICNEKPQALSKCVPKSIPSSDT 602
A + CQ C +K ++KC+ K+ SS+T
Sbjct: 641 ASVKKEATCQYCKKKGHIVAKCLKKAKKSSET 672
>SB_7096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = -3
Query: 602 CRSDPHPMGAHGLCVNKFPITGFTECHGSCDL-ELSITTRPVRTSLRASVVRPRSTAACP 426
C PH + L N +TG + + + + + T P + S+ R R
Sbjct: 306 CIDSPHSAPLYQLTRNHGDVTGDSASSFTTSVFDDTFCTNPYYSPTSESMARTRRQLDLS 365
Query: 425 CDSRAKTGRSDRTGSPRRRAA 363
+A T R R +PRRR +
Sbjct: 366 LPDQASTPRRGRPSTPRRRCS 386
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -3
Query: 494 TTRPVRTSLRASVVRPRSTAACPCDSRAKTGRSDRTG-SPRRRAATVPPADPDSLST 327
TT + S R P P RA +G + PR R AT PP P + T
Sbjct: 202 TTPSPKKSEREKKTSPTPPRPAPARDRAASGPGPKPAVKPRDRLATAPPGRPPAPHT 258
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 581 MGAHGLCVNKFPITGFTECHG 519
+G+ G C+ F FTECHG
Sbjct: 1594 LGSSGSCLESFRPNPFTECHG 1614
>SB_45429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 181 NYQSRDVIRVVVSPRFPRSAGIYPGHVLPVPLRL 282
NYQ R IR + R+PR A I P +P P L
Sbjct: 42 NYQVRAKIRELYRARYPRRAVISPQKSVPPPRSL 75
>SB_37947| Best HMM Match : SAP (HMM E-Value=8e-07)
Length = 389
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 181 NYQSRDVIRVVVSPRFPRSAGIYPGHVLPVPLRL 282
NYQ R IR + R+PR A I P +P P L
Sbjct: 42 NYQVRAKIRELYRARYPRRAVISPQKSVPPPRSL 75
>SB_50424| Best HMM Match : DUF581 (HMM E-Value=5.1)
Length = 496
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 348 GPGLTKHPKPGHASYSGTKNP-VQPERDREYVTRI-YSSASGEARRNHDSNYITT 190
GPG+ H + S+ TKNP VQ E D+ I + +G + SN+ T
Sbjct: 129 GPGVLSHEQLRGCSFLITKNPFVQNEADKTIENTINWDCKTGSGYISFSSNFAAT 183
>SB_20247| Best HMM Match : Keratin_B2 (HMM E-Value=0.1)
Length = 356
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = -3
Query: 488 RPVRTSLRASVVRPRSTAACPCDSRAKTGRSDRTGSPRRRAATVPPADPDSLSTLNLVTH 309
RP S + RP S + +R T P+ ++ + A P+SLST
Sbjct: 70 RPNSQSTFTTTARPNSQSTFTTTARPFQPTFTTTARPKSQSTSTTTARPNSLSTFTTTAR 129
Query: 308 P 306
P
Sbjct: 130 P 130
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 294 KNPVQPERDREYVTRIYSSASGEARRNHDSNY 199
K P+ P +Y+ Y +AR NHD+ +
Sbjct: 1007 KQPIVPGELSDYIVSAYVEMRKDARNNHDTTF 1038
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
Frame = -2
Query: 441 YSGVSVRLTCEDGTVRPHRVATPA-------RCHCAACGPGLTKHPKPGHASYSGT 295
Y G+ VR T +G RP R P HC +++ PG + Y+ +
Sbjct: 2771 YEGLEVRKTVSEGVARPPRRRKPTARSIRWKELHCNTSSSSSSQNTSPGTSPYTSS 2826
>SB_33912| Best HMM Match : Transposase_27 (HMM E-Value=3.6)
Length = 760
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 361 VAARRRGDPVRS---DRPVFARESHGHAAVLRGLTTLARRLVRTGLVVIDSSKSQEPWHS 531
VA RR DPV+S D + H A + TT AR + + +V S+K W S
Sbjct: 143 VALRRARDPVQSTASDVTPLLTQLEIHVAEDKSFTTRARDIFKETVVTHKSAKESRRWLS 202
>SB_33643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -2
Query: 477 HESACECCQAAKYSGVSVRLTCEDGTVRPHRVATPARCHCAACG 346
H ++C C + VSV L C +V+ C C CG
Sbjct: 315 HFTSCAFCTPVSKNVVSVHLKCAGDLKVVKKVSIIQSCSCRPCG 358
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,415,362
Number of Sequences: 59808
Number of extensions: 498726
Number of successful extensions: 1584
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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