Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00467
(751 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 128 5e-30
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 124 6e-29
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 123 1e-28
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 121 5e-28
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 118 7e-27
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 71 7e-13
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 69 3e-12
11_02_0118 - 8486986-8488925,8488971-8489041,8489884-8490728 28 6.9
07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207 28 6.9
03_01_0199 - 1588058-1588147,1588228-1588626 28 6.9
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 128 bits (309), Expect = 5e-30
Identities = 55/81 (67%), Positives = 71/81 (87%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K SY+AIK +K A+EG LKGI+GY E+ +VS+DF+GDS SSIFDA AGI+LNDNFVKL
Sbjct: 276 KAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKL 335
Query: 337 ISWYDNEYGYSSRVIDLIKYI 275
++WYDNE+GYS+RVIDLI+++
Sbjct: 336 VAWYDNEWGYSNRVIDLIRHM 356
Score = 103 bits (247), Expect = 2e-22
Identities = 53/82 (64%), Positives = 59/82 (71%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPS K WR GR A NIIP+STGAAKAVGKV+P LNGKLTGM+
Sbjct: 198 GLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMS 257
Query: 570 FRVPVANVSVVDLTVRLGKPAA 505
FRVP +VSVVDLTVR+ K A+
Sbjct: 258 FRVPTVDVSVVDLTVRIEKAAS 279
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 124 bits (300), Expect = 6e-29
Identities = 55/81 (67%), Positives = 69/81 (85%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K SY+ IK +KE +EG LKGILGY E+ +VS+DF GD+ SSIFDA AGI+LNDNFVKL
Sbjct: 301 KPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAGIALNDNFVKL 360
Query: 337 ISWYDNEYGYSSRVIDLIKYI 275
+SWYDNE+GYSSRV+DLI+++
Sbjct: 361 VSWYDNEWGYSSRVVDLIRHM 381
Score = 111 bits (266), Expect = 8e-25
Identities = 57/82 (69%), Positives = 61/82 (74%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPS K WR GR A NIIP+STGAAKAVGKV+PALNGKLTGMA
Sbjct: 223 GLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMA 282
Query: 570 FRVPVANVSVVDLTVRLGKPAA 505
FRVP +VSVVDLTVRL KPA+
Sbjct: 283 FRVPTVDVSVVDLTVRLEKPAS 304
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 123 bits (297), Expect = 1e-28
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K SY+ IK +KE AEG LKGILGY E+ +VS+DF GDS SSIFDA AGI+L+D FVKL
Sbjct: 272 KPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIALSDTFVKL 331
Query: 337 ISWYDNEYGYSSRVIDLIKYIQS 269
+SWYDNE+GYS+RVIDLI+++ S
Sbjct: 332 VSWYDNEWGYSTRVIDLIRHMHS 354
Score = 109 bits (263), Expect = 2e-24
Identities = 57/82 (69%), Positives = 61/82 (74%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPS K WR GR A NIIP+STGAAKAVGKV+PALNGKLTGMA
Sbjct: 194 GLMTTVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMA 253
Query: 570 FRVPVANVSVVDLTVRLGKPAA 505
FRVP +VSVVDLTVRL KPA+
Sbjct: 254 FRVPTVDVSVVDLTVRLEKPAS 275
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 121 bits (292), Expect = 5e-28
Identities = 53/81 (65%), Positives = 70/81 (86%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K+ SYE +K +KEA+EG LKGILGYT++ VVS+DFIGD+ SSIFDA AGI L+ +F+KL
Sbjct: 328 KSASYEDVKAAIKEASEGSLKGILGYTDEDVVSNDFIGDTRSSIFDAKAGIGLSSSFMKL 387
Query: 337 ISWYDNEYGYSSRVIDLIKYI 275
+SWYDNE+GYS+RV+DLI ++
Sbjct: 388 VSWYDNEWGYSNRVLDLIGHM 408
Score = 111 bits (268), Expect = 4e-25
Identities = 58/82 (70%), Positives = 61/82 (74%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPS K WR GRGA QNIIP+STGAAKAVGKV+PALNGKLTGMA
Sbjct: 250 GLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPALNGKLTGMA 309
Query: 570 FRVPVANVSVVDLTVRLGKPAA 505
FRVP NVSVVDLT RL K A+
Sbjct: 310 FRVPTPNVSVVDLTCRLEKSAS 331
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 118 bits (283), Expect = 7e-27
Identities = 50/81 (61%), Positives = 69/81 (85%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K+ SY+ +K +K A+EG LKGILGYT++ VVS+DF+GD+ SSIFDA AGI L+ +F+KL
Sbjct: 387 KSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKL 446
Query: 337 ISWYDNEYGYSSRVIDLIKYI 275
+SWYDNE+GYS+RV+DLI ++
Sbjct: 447 VSWYDNEWGYSNRVLDLIAHM 467
Score = 108 bits (260), Expect = 4e-24
Identities = 56/82 (68%), Positives = 60/82 (73%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPS K WR GRGA QNIIP+STGAAKAVGKV+P LNGKLTGMA
Sbjct: 309 GLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMA 368
Query: 570 FRVPVANVSVVDLTVRLGKPAA 505
FRVP NVSVVDLT R+ K A+
Sbjct: 369 FRVPTPNVSVVDLTCRIEKSAS 390
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 71.3 bits (167), Expect = 7e-13
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = -1
Query: 481 KEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSS 302
++AA GPL GIL + +VS DF SS DA+ + + D+ VK+++WYDNE+GYS
Sbjct: 342 RKAAAGPLSGILDVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYSQ 401
Query: 301 RVIDLIKYIQSK 266
RV+DL + SK
Sbjct: 402 RVVDLAHLVASK 413
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/91 (45%), Positives = 48/91 (52%)
Frame = -2
Query: 678 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPAAMK 499
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL + K
Sbjct: 275 RRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTGITA 334
Query: 498 PSSKRSRRQLKVL*RAFSGILKIKLCPQTSL 406
+ R K SGIL + P S+
Sbjct: 335 DDVNAAFR--KAAAGPLSGILDVCDVPLVSV 363
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2
Query: 678 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGK 514
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL V++ K
Sbjct: 263 RRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSK 317
Score = 66.9 bits (156), Expect = 2e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = -1
Query: 502 EAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYD 323
E + Q +++A LKGIL + +VS DF S DA+ + + D+ VK+I+WYD
Sbjct: 322 EEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTIDASLSMVMGDDMVKVIAWYD 381
Query: 322 NEYGYSSRVIDLIKYIQSK 266
NE+GYS RV+DL + ++
Sbjct: 382 NEWGYSQRVVDLADIVANQ 400
>11_02_0118 - 8486986-8488925,8488971-8489041,8489884-8490728
Length = 951
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -1
Query: 397 HSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSKD*TLI*CMNV 236
H IFD S +NF+ + + ++ +G ++ L+ Y ++ ++ MNV
Sbjct: 491 HDVIFDLIISKSAEENFITVFGYQNHAFGPQDKIRRLVHYHGQEEIMVMSDMNV 544
>07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207
Length = 153
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 315 YSLSYQLISFTKLSFKEIPAAASKIEECESPMK 413
YSL + + TK FK+ K EEC +P K
Sbjct: 77 YSLVMKCLENTKNDFKKCKTLIDKYEECSNPPK 109
>03_01_0199 - 1588058-1588147,1588228-1588626
Length = 162
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 503 IAAGFPRRTVRSTTDTLATGTRNAIPVSLPLRAGITLPTALAAPVEAG 646
+A+G R + S + A R +I S +AG+ LPT A G
Sbjct: 57 VASGLSARDLESGAELAAPKRRRSIGGSTEWKAGLLLPTTTTASARKG 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,618,893
Number of Sequences: 37544
Number of extensions: 318480
Number of successful extensions: 863
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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