Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00467
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 129 2e-30
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 129 2e-30
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 129 2e-30
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 127 7e-30
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 127 7e-30
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 126 2e-29
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 126 2e-29
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 126 2e-29
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 126 2e-29
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 28 6.2
U53139-11|AAK18936.2| 353|Caenorhabditis elegans Serpentine rec... 28 8.1
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 8.1
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 8.1
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 8.1
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 129 bits (311), Expect = 2e-30
Identities = 59/84 (70%), Positives = 70/84 (83%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K S + IK+ VK AA+GP+KGIL YTEDQVVS+DF+ D HSSIFDA A ISLN NFVKL
Sbjct: 257 KPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKL 316
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 317 VSWYDNEYGYSNRVVDLIGYIATR 340
Score = 126 bits (304), Expect = 2e-29
Identities = 65/88 (73%), Positives = 67/88 (76%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMA
Sbjct: 179 GLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMA 238
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSK 487
FRVP +VSVVDLTVRL KPA+M K
Sbjct: 239 FRVPTPDVSVVDLTVRLEKPASMDDIKK 266
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 129 bits (311), Expect = 2e-30
Identities = 59/84 (70%), Positives = 70/84 (83%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K S + IK+ VK AA+GP+KGIL YTEDQVVS+DF+ D HSSIFDA A ISLN NFVKL
Sbjct: 257 KPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKL 316
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 317 VSWYDNEYGYSNRVVDLIGYIATR 340
Score = 126 bits (304), Expect = 2e-29
Identities = 65/88 (73%), Positives = 67/88 (76%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMA
Sbjct: 179 GLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMA 238
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSK 487
FRVP +VSVVDLTVRL KPA+M K
Sbjct: 239 FRVPTPDVSVVDLTVRLEKPASMDDIKK 266
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 129 bits (311), Expect = 2e-30
Identities = 59/84 (70%), Positives = 70/84 (83%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K S + IK+ VK AA+GP+KGIL YTEDQVVS+DF+ D HSSIFDA A ISLN NFVKL
Sbjct: 257 KPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKL 316
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 317 VSWYDNEYGYSNRVVDLIGYIATR 340
Score = 126 bits (304), Expect = 2e-29
Identities = 65/88 (73%), Positives = 67/88 (76%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMA
Sbjct: 179 GLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMA 238
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSK 487
FRVP +VSVVDLTVRL KPA+M K
Sbjct: 239 FRVPTPDVSVVDLTVRLEKPASMDDIKK 266
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 127 bits (307), Expect = 7e-30
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K S + IK+ VK AA+GP+KGIL YTEDQVVS+DF+ D HSSIFD A ISLN NFVKL
Sbjct: 257 KPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSDPHSSIFDTGACISLNPNFVKL 316
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 317 VSWYDNEYGYSNRVVDLIGYIATR 340
Score = 126 bits (304), Expect = 2e-29
Identities = 65/88 (73%), Positives = 67/88 (76%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMA
Sbjct: 179 GLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMA 238
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSK 487
FRVP +VSVVDLTVRL KPA+M K
Sbjct: 239 FRVPTPDVSVVDLTVRLEKPASMDDIKK 266
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 127 bits (307), Expect = 7e-30
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K S + IK+ VK AA+GP+KGIL YTEDQVVS+DF+ D HSSIFD A ISLN NFVKL
Sbjct: 257 KPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSDPHSSIFDTGACISLNPNFVKL 316
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 317 VSWYDNEYGYSNRVVDLIGYIATR 340
Score = 126 bits (304), Expect = 2e-29
Identities = 65/88 (73%), Positives = 67/88 (76%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMA
Sbjct: 179 GLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMA 238
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSK 487
FRVP +VSVVDLTVRL KPA+M K
Sbjct: 239 FRVPTPDVSVVDLTVRLEKPASMDDIKK 266
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 126 bits (304), Expect = 2e-29
Identities = 56/84 (66%), Positives = 71/84 (84%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K S + IK+ +K AA+GP+KGIL YTEDQVVS+DF+ D++SSIFDA A ISLN +FVKL
Sbjct: 257 KPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKL 316
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 317 VSWYDNEFGYSNRVVDLISYIATK 340
Score = 123 bits (297), Expect = 1e-28
Identities = 63/88 (71%), Positives = 66/88 (75%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMA
Sbjct: 179 GLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMA 238
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSK 487
FRVP +VSVVDLT RL KPA++ K
Sbjct: 239 FRVPTPDVSVVDLTARLEKPASLDDIKK 266
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 126 bits (304), Expect = 2e-29
Identities = 56/84 (66%), Positives = 71/84 (84%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K S + IK+ +K AA+GP+KGIL YTEDQVVS+DF+ D++SSIFDA A ISLN +FVKL
Sbjct: 257 KPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKL 316
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 317 VSWYDNEFGYSNRVVDLISYIATK 340
Score = 123 bits (297), Expect = 1e-28
Identities = 63/88 (71%), Positives = 66/88 (75%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMA
Sbjct: 179 GLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMA 238
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSK 487
FRVP +VSVVDLT RL KPA++ K
Sbjct: 239 FRVPTPDVSVVDLTARLEKPASLDDIKK 266
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 126 bits (304), Expect = 2e-29
Identities = 56/84 (66%), Positives = 71/84 (84%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K S + IK+ +K AA+GP+KGIL YTEDQVVS+DF+ D++SSIFDA A ISLN +FVKL
Sbjct: 257 KPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKL 316
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 317 VSWYDNEFGYSNRVVDLISYIATK 340
Score = 123 bits (297), Expect = 1e-28
Identities = 63/88 (71%), Positives = 66/88 (75%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMA
Sbjct: 179 GLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMA 238
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSK 487
FRVP +VSVVDLT RL KPA++ K
Sbjct: 239 FRVPTPDVSVVDLTARLEKPASLDDIKK 266
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 126 bits (304), Expect = 2e-29
Identities = 56/84 (66%), Positives = 71/84 (84%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K S + IK+ +K AA+GP+KGIL YTEDQVVS+DF+ D++SSIFDA A ISLN +FVKL
Sbjct: 257 KPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKL 316
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 317 VSWYDNEFGYSNRVVDLISYIATK 340
Score = 123 bits (297), Expect = 1e-28
Identities = 63/88 (71%), Positives = 66/88 (75%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMA
Sbjct: 179 GLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMA 238
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSK 487
FRVP +VSVVDLT RL KPA++ K
Sbjct: 239 FRVPTPDVSVVDLTARLEKPASLDDIKK 266
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 505 YEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLND 353
Y Q +KE EG LK G TE++ + S + + S+I D A + L +
Sbjct: 717 YSKCSQYIKELEEGKLKAQPGCTEEETLESIILREL-STIRDHAGQVCLRN 766
>U53139-11|AAK18936.2| 353|Caenorhabditis elegans Serpentine
receptor, class w protein71 protein.
Length = 353
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 62 FCDFVKYLNIANHFYKYFL 118
FCD + +L IA + Y+YF+
Sbjct: 64 FCDLIVFLTIAQNRYRYFI 82
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 490 QKVKEAAEGPLKGILGYTEDQVVSSDFIG 404
QK++ E P++ +L Y ++ VSS+ IG
Sbjct: 1374 QKIETPTENPIRSLLIYMNEKSVSSEAIG 1402
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 490 QKVKEAAEGPLKGILGYTEDQVVSSDFIG 404
QK++ E P++ +L Y ++ VSS+ IG
Sbjct: 1412 QKIETPTENPIRSLLIYMNEKSVSSEAIG 1440
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 490 QKVKEAAEGPLKGILGYTEDQVVSSDFIG 404
QK++ E P++ +L Y ++ VSS+ IG
Sbjct: 1374 QKIETPTENPIRSLLIYMNEKSVSSEAIG 1402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,709,637
Number of Sequences: 27780
Number of extensions: 288959
Number of successful extensions: 728
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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