Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00467
(751 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 126 2e-29
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 125 4e-29
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 124 8e-29
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 121 4e-28
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 74 1e-13
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 69 3e-12
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 69 3e-12
At5g10500.1 68418.m01216 kinase interacting family protein simil... 31 0.82
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 29 3.3
At1g74430.1 68414.m08623 myb family transcription factor (MYB95)... 28 5.8
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 28 7.6
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 126 bits (303), Expect = 2e-29
Identities = 55/81 (67%), Positives = 70/81 (86%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K +Y+ IK+ +KE +EG LKGILGYTED VVS+DF+GD+ SSIFDA AGI+L+D FVKL
Sbjct: 255 KAATYDEIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKL 314
Query: 337 ISWYDNEYGYSSRVIDLIKYI 275
+SWYDNE+GYSSRV+DLI ++
Sbjct: 315 VSWYDNEWGYSSRVVDLIVHM 335
Score = 105 bits (252), Expect = 3e-23
Identities = 56/93 (60%), Positives = 62/93 (66%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPS K WR GR A NIIP+STGAAKAVGKV+PALNGKLTGM+
Sbjct: 177 GLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMS 236
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSKRSRRQ 472
FRVP +VSVVDLTVRL K A K + +
Sbjct: 237 FRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEE 269
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 125 bits (301), Expect = 4e-29
Identities = 54/81 (66%), Positives = 70/81 (86%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K +Y+ IK+ +KE +EG +KGILGYTED VVS+DF+GD+ SSIFDA AGI+L+D FVKL
Sbjct: 255 KAATYDEIKKAIKEESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKL 314
Query: 337 ISWYDNEYGYSSRVIDLIKYI 275
+SWYDNE+GYSSRV+DLI ++
Sbjct: 315 VSWYDNEWGYSSRVVDLIVHM 335
Score = 104 bits (249), Expect = 7e-23
Identities = 55/93 (59%), Positives = 62/93 (66%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPS K WR GR A NIIP+STGAAKAVGKV+P+LNGKLTGM+
Sbjct: 177 GLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMS 236
Query: 570 FRVPVANVSVVDLTVRLGKPAAMKPSSKRSRRQ 472
FRVP +VSVVDLTVRL K A K + +
Sbjct: 237 FRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEE 269
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 124 bits (298), Expect = 8e-29
Identities = 54/81 (66%), Positives = 70/81 (86%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K SYE +K +K A+EGPLKGILGYT++ VVS+DF+GDS SSIFDA AGI L+ +FVKL
Sbjct: 335 KGASYEDVKAAIKHASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDANAGIGLSKSFVKL 394
Query: 337 ISWYDNEYGYSSRVIDLIKYI 275
+SWYDNE+GYS+RV+DLI+++
Sbjct: 395 VSWYDNEWGYSNRVLDLIEHM 415
Score = 110 bits (264), Expect = 1e-24
Identities = 57/82 (69%), Positives = 61/82 (74%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPS K WR GRGA QNIIP+STGAAKAVGKV+P LNGKLTGMA
Sbjct: 257 GLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMA 316
Query: 570 FRVPVANVSVVDLTVRLGKPAA 505
FRVP +NVSVVDLT RL K A+
Sbjct: 317 FRVPTSNVSVVDLTCRLEKGAS 338
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 121 bits (292), Expect = 4e-28
Identities = 53/81 (65%), Positives = 70/81 (86%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K SYE +K +K A+EGPL+GILGYTE+ VVS+DF+GDS SSIFDA AGI L+ +F+KL
Sbjct: 333 KDASYEDVKAAIKFASEGPLRGILGYTEEDVVSNDFLGDSRSSIFDANAGIGLSKSFMKL 392
Query: 337 ISWYDNEYGYSSRVIDLIKYI 275
+SWYDNE+GYS+RV+DLI+++
Sbjct: 393 VSWYDNEWGYSNRVLDLIEHM 413
Score = 109 bits (263), Expect = 1e-24
Identities = 57/82 (69%), Positives = 60/82 (73%)
Frame = -2
Query: 750 GLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMA 571
GLM VDGPS K WR GRGA QNIIP+STGAAKAVGKV+P LNGKLTGMA
Sbjct: 255 GLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMA 314
Query: 570 FRVPVANVSVVDLTVRLGKPAA 505
FRVP NVSVVDLT RL K A+
Sbjct: 315 FRVPTPNVSVVDLTCRLEKDAS 336
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = -1
Query: 517 KTCSYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 338
K + E + + ++AA GP+KGIL + +VS DF S+ D++ + + D+ VK+
Sbjct: 334 KGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKV 393
Query: 337 ISWYDNEYGYSSRVIDLIKYIQSK 266
++WYDNE+GYS RV+DL + SK
Sbjct: 394 VAWYDNEWGYSQRVVDLAHLVASK 417
Score = 68.1 bits (159), Expect = 6e-12
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = -2
Query: 678 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGK 514
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL + + K
Sbjct: 279 RRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVINVEK 333
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2
Query: 678 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGK 514
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL V++ K
Sbjct: 257 RRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSK 311
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/72 (41%), Positives = 47/72 (65%)
Frame = -1
Query: 502 EAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYD 323
E + +++AE LKGIL ++ +VS DF S+ D++ + + D+ VK+I+WYD
Sbjct: 316 EEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYD 375
Query: 322 NEYGYSSRVIDL 287
NE+GYS RV+DL
Sbjct: 376 NEWGYSQRVVDL 387
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2
Query: 678 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGK 514
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL V++ K
Sbjct: 260 RRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSK 314
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/72 (44%), Positives = 47/72 (65%)
Frame = -1
Query: 502 EAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYD 323
E + ++AAE LKGIL ++ +VS DF SS D++ + + D+ VK+I+WYD
Sbjct: 319 EEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYD 378
Query: 322 NEYGYSSRVIDL 287
NE+GYS RV+DL
Sbjct: 379 NEWGYSQRVVDL 390
>At5g10500.1 68418.m01216 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 848
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 315 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 446
Y +LISF + SFK A A + + +++ +TT +SV+P
Sbjct: 59 YKRRPELISFVEESFKAYRALAERYDHISKELQNANTTIASVFP 102
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 315 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 446
Y +LISF + S++ A A + + + +++ +TT +SV+P
Sbjct: 3 YKKRPELISFVEESYRAYRALAERYDHISTELQNANTTIASVFP 46
>At1g74430.1 68414.m08623 myb family transcription factor (MYB95)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 271
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 571 CHSSQLAIKSRDNLTHSFGSTSRGRNDVLLSTTAITP*FSRRSINSFLCSSCG 729
C +LA K D +TH +T+ DV S+T +P S S + CSS G
Sbjct: 111 CLKKRLAKKGIDPMTHEPTTTTSLTVDVTSSSTTSSPTPSPTSSSFSSCSSTG 163
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 493 KQKVKEAAEGPLKGILGYTE-DQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLIS 332
+++ KE E P+KG E + +V + IGD S+ + S N+N+ L S
Sbjct: 814 EEEEKEVLENPVKGEEEAREMETLVVEEDIGDETPSLTEIVENSSENENYTSLRS 868
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,637,053
Number of Sequences: 28952
Number of extensions: 258008
Number of successful extensions: 736
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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