Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00466
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   0.96 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.0  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 462 ESQGIKLLAAELKSKLWCTVPTRSCPIT 545
           E +G++L+  E+K +    + ++SCPIT
Sbjct: 354 EQEGLQLIN-EMKKRYSALINSQSCPIT 380


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +3

Query: 240 TVPRGSNGPDMGRKIPNRIPVRDENDCDTRAYIKDDSVKIVTL 368
           T    SN    G +  N IPV  +      AY++ D + I TL
Sbjct: 125 TFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQQDDLFIGTL 167


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +3

Query: 240 TVPRGSNGPDMGRKIPNRIPVRDENDCDTRAYIKDDSVKIVTL 368
           T    SN    G +  N IPV  +      AY++ D + I TL
Sbjct: 125 TFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQQDDLFIGTL 167


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 235 NRQYQEVATGPTWVARSPTGSRCATKTTATP 327
           N+      T PT V  S      A ++ ATP
Sbjct: 191 NKSASRTTTSPTKVKASKASPAAAPRSVATP 221


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 573  TWLSSTSNFLWICFSSASRPGTTTR 647
            TW SST+   W   ++ +R  TTTR
Sbjct: 1041 TWWSSTTTSPW-WTTTTTRRTTTTR 1064


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -2

Query: 484  RSLIP*DSTGMPYMTTMPTRSLTILVMSLALFGMMGALMSVTILT 350
            R L+P D T     T  P  +  I +++    G      +VTI+T
Sbjct: 946  RVLVPGDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIIT 990


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
          transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 55 GACPVDPSSCAPSL 14
          GA   DP SC PS+
Sbjct: 41 GAVQPDPGSCDPSV 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,996
Number of Sequences: 336
Number of extensions: 3463
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)